RNA–Protein interactions for RNA: ENST00000534641.5

GTF2H1-214, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 2 BASIC

Gene GTF2H1, Length 2,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-214ENST00000534641 NISCHQ9Y2I1 1504 aa21.28■■□□□ 1
GTF2H1-214ENST00000534641 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.52
GTF2H1-214ENST00000534641 ZCCHC6Q5VYS8 1495 aaKnown RBP18.04■□□□□ 0.48
GTF2H1-214ENST00000534641 SUPT5HO00267 1087 aaKnown RBP18■□□□□ 0.47
GTF2H1-214ENST00000534641 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
GTF2H1-214ENST00000534641 MYO15BQ96JP2 1530 aa17.65■□□□□ 0.42
GTF2H1-214ENST00000534641 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.41
GTF2H1-214ENST00000534641 DCAF8L2P0C7V8 631 aa17.53■□□□□ 0.4
GTF2H1-214ENST00000534641 DCAF1Q9Y4B6 1507 aa17.46■□□□□ 0.39
GTF2H1-214ENST00000534641 HRCP23327 699 aa17.44■□□□□ 0.38
GTF2H1-214ENST00000534641 PCGF6Q9BYE7 350 aa17.28■□□□□ 0.36
GTF2H1-214ENST00000534641 LOC105371045A0A1W2PR82 267 aa17.13■□□□□ 0.33
GTF2H1-214ENST00000534641 ABCC9O60706 1549 aa17.06■□□□□ 0.32
GTF2H1-214ENST00000534641 PPARGC1BQ86YN6 1023 aaKnown RBP17.05■□□□□ 0.32
GTF2H1-214ENST00000534641 RSF1Q96T23 1441 aaPredicted RBP16.93■□□□□ 0.3
GTF2H1-214ENST00000534641 TRIM26Q12899 539 aaPredicted RBP16.9■□□□□ 0.3
GTF2H1-214ENST00000534641 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
GTF2H1-214ENST00000534641 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
GTF2H1-214ENST00000534641 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
GTF2H1-214ENST00000534641 FAM9AQ8IZU1 332 aaPredicted RBP16.63■□□□□ 0.25
GTF2H1-214ENST00000534641 CECR2Q9BXF3 1484 aa16.6■□□□□ 0.25
GTF2H1-214ENST00000534641 ZEB1P37275 1124 aaPredicted RBP16.6■□□□□ 0.25
GTF2H1-214ENST00000534641 NACADO15069 1562 aa16.57■□□□□ 0.24
GTF2H1-214ENST00000534641 MROH2BQ7Z745 1585 aa16.56■□□□□ 0.24
GTF2H1-214ENST00000534641 WIZO95785 1651 aa16.49■□□□□ 0.23
GTF2H1-214ENST00000534641 EHMT2Q96KQ7 1210 aa16.47■□□□□ 0.23
GTF2H1-214ENST00000534641 BAZ1AQ9NRL2 1556 aaPredicted RBP16.39■□□□□ 0.21
GTF2H1-214ENST00000534641 EIF4G1Q04637 1599 aaKnown RBP16.38■□□□□ 0.21
GTF2H1-214ENST00000534641 TOP2AP11388 1531 aaKnown RBP16.22■□□□□ 0.19
GTF2H1-214ENST00000534641 SCAF1Q9H7N4 1312 aaKnown RBP16.2■□□□□ 0.18
GTF2H1-214ENST00000534641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
GTF2H1-214ENST00000534641 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
GTF2H1-214ENST00000534641 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
GTF2H1-214ENST00000534641 SMARCA4P51532 1647 aa16.16■□□□□ 0.18
GTF2H1-214ENST00000534641 SMARCA2P51531 1590 aa16.15■□□□□ 0.18
GTF2H1-214ENST00000534641 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
GTF2H1-214ENST00000534641 CCER1Q8TC90 406 aaPredicted RBP16.14■□□□□ 0.17
GTF2H1-214ENST00000534641 CEP162Q5TB80 1403 aa16.09■□□□□ 0.17
GTF2H1-214ENST00000534641 SOGA1O94964 1423 aa16.08■□□□□ 0.16
GTF2H1-214ENST00000534641 UNC13AQ9UPW8 1703 aa16.07■□□□□ 0.16
GTF2H1-214ENST00000534641 PELP1Q8IZL8 1130 aaKnown RBP16.05■□□□□ 0.16
GTF2H1-214ENST00000534641 TNIKQ9UKE5 1360 aa16.05■□□□□ 0.16
GTF2H1-214ENST00000534641 RUSC2Q8N2Y8 1516 aa16■□□□□ 0.15
GTF2H1-214ENST00000534641 EEA1Q15075 1411 aa16■□□□□ 0.15
GTF2H1-214ENST00000534641 TTBK1Q5TCY1 1321 aaPredicted RBP16■□□□□ 0.15
GTF2H1-214ENST00000534641 CSRNP3Q8WYN3 585 aa15.99■□□□□ 0.15
GTF2H1-214ENST00000534641 ACIN1Q9UKV3 1341 aaKnown RBP15.97■□□□□ 0.15
GTF2H1-214ENST00000534641 DIEXFQ68CQ4 756 aaKnown RBP15.95■□□□□ 0.14
GTF2H1-214ENST00000534641 NEUROD1Q13562 356 aa15.94■□□□□ 0.14
GTF2H1-214ENST00000534641 UBTFP17480 764 aaKnown RBP15.92■□□□□ 0.14
GTF2H1-214ENST00000534641 GOLGA3Q08378 1498 aa15.91■□□□□ 0.14
GTF2H1-214ENST00000534641 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
GTF2H1-214ENST00000534641 PEG3Q9GZU2 1588 aa15.85■□□□□ 0.13
GTF2H1-214ENST00000534641 SYNJ1O43426 1573 aa15.81■□□□□ 0.12
GTF2H1-214ENST00000534641 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
GTF2H1-214ENST00000534641 CENPBP07199 599 aaPredicted RBP15.8■□□□□ 0.12
GTF2H1-214ENST00000534641 CEP164Q9UPV0 1460 aa15.8■□□□□ 0.12
GTF2H1-214ENST00000534641 KIF21BO75037 1637 aa15.8■□□□□ 0.12
GTF2H1-214ENST00000534641 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
GTF2H1-214ENST00000534641 GTF3C3Q9Y5Q9 886 aa15.78■□□□□ 0.12
GTF2H1-214ENST00000534641 CLIP1P30622 1438 aa15.74■□□□□ 0.11
GTF2H1-214ENST00000534641 HNRNPUL2Q1KMD3 747 aaKnown RBP15.7■□□□□ 0.1
GTF2H1-214ENST00000534641 VPS8Q8N3P4 1428 aa15.7■□□□□ 0.1
GTF2H1-214ENST00000534641 ATAD2BQ9ULI0 1458 aa15.7■□□□□ 0.1
GTF2H1-214ENST00000534641 BAZ1BQ9UIG0 1483 aaKnown RBP15.69■□□□□ 0.1
GTF2H1-214ENST00000534641 RAPGEF2Q9Y4G8 1499 aa15.68■□□□□ 0.1
GTF2H1-214ENST00000534641 MIER1Q8N108 512 aa15.6■□□□□ 0.09
GTF2H1-214ENST00000534641 TOP2BQ02880 1626 aa15.59■□□□□ 0.09
GTF2H1-214ENST00000534641 APLP2Q06481 763 aa15.58■□□□□ 0.09
GTF2H1-214ENST00000534641 YTHDC1Q96MU7 727 aaKnown RBP15.57■□□□□ 0.08
GTF2H1-214ENST00000534641 RANGAP1P46060 587 aaPredicted RBP15.54■□□□□ 0.08
GTF2H1-214ENST00000534641 BIVM-ERCC5R4GMW8 1640 aa15.54■□□□□ 0.08
GTF2H1-214ENST00000534641 ERICH3Q5RHP9 1530 aa15.5■□□□□ 0.07
GTF2H1-214ENST00000534641 PRXQ9BXM0 1461 aa15.5■□□□□ 0.07
GTF2H1-214ENST00000534641 ARAP1Q96P48 1450 aa15.49■□□□□ 0.07
GTF2H1-214ENST00000534641 DHX57Q6P158 1386 aaKnown RBP15.46■□□□□ 0.07
GTF2H1-214ENST00000534641 CLSPNQ9HAW4 1339 aa15.46■□□□□ 0.06
GTF2H1-214ENST00000534641 KANK4Q5T7N3 995 aaPredicted RBP15.43■□□□□ 0.06
GTF2H1-214ENST00000534641 CUX1P39880 1505 aa15.4■□□□□ 0.06
GTF2H1-214ENST00000534641 RRBP1Q9P2E9 1410 aaKnown RBP15.39■□□□□ 0.05
GTF2H1-214ENST00000534641 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
GTF2H1-214ENST00000534641 KIF27Q86VH2 1401 aa15.36■□□□□ 0.05
GTF2H1-214ENST00000534641 NCAPD3P42695 1498 aa15.35■□□□□ 0.05
GTF2H1-214ENST00000534641 CUX2O14529 1486 aa15.34■□□□□ 0.05
GTF2H1-214ENST00000534641 ARHGAP35Q9NRY4 1499 aa15.32■□□□□ 0.04
GTF2H1-214ENST00000534641 CFTRP13569 1480 aa15.29■□□□□ 0.04
GTF2H1-214ENST00000534641 CCNB3Q8WWL7 1395 aa15.29■□□□□ 0.04
GTF2H1-214ENST00000534641 MYT1Q01538 1121 aa15.27■□□□□ 0.03
GTF2H1-214ENST00000534641 IGF1RP08069 1367 aa15.2■□□□□ 0.02
GTF2H1-214ENST00000534641 ITGAEP38570 1179 aa15.19■□□□□ 0.02
GTF2H1-214ENST00000534641 AEBP2Q6ZN18 517 aaPredicted RBP15.19■□□□□ 0.02
GTF2H1-214ENST00000534641 MAPKBP1O60336 1514 aa15.18■□□□□ 0.02
GTF2H1-214ENST00000534641 RAB3GAP2Q9H2M9 1393 aa15.18■□□□□ 0.02
GTF2H1-214ENST00000534641 TIAM1Q13009 1591 aa15.18■□□□□ 0.02
GTF2H1-214ENST00000534641 PRDM2Q13029 1718 aa15.18■□□□□ 0.02
GTF2H1-214ENST00000534641 MAP3K1Q13233 1512 aa15.18■□□□□ 0.02
GTF2H1-214ENST00000534641 SUPT16HQ9Y5B9 1047 aaKnown RBP15.17■□□□□ 0.02
GTF2H1-214ENST00000534641 LRRC9Q6ZRR7 1453 aa15.12■□□□□ 0.01
GTF2H1-214ENST00000534641 CARMIL1Q5VZK9 1371 aa15.12■□□□□ 0.01
GTF2H1-214ENST00000534641 SETD5Q9C0A6 1442 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms