RNA–Protein interactions for RNA: ENST00000488852.5

LINC00635-207, long intergenic non-protein coding RNA 635, humanhuman

TSL 1 (best) BASIC

Gene LINC00635, Length 1,197 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00635-207ENST00000488852 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
LINC00635-207ENST00000488852 CHIC1Q5VXU3 224 aa27.1■■□□□ 1.93
LINC00635-207ENST00000488852 SENP3Q9H4L4 574 aaPredicted RBP24.2■■□□□ 1.46
LINC00635-207ENST00000488852 PHF23Q9BUL5 403 aaPredicted RBP23.97■■□□□ 1.43
LINC00635-207ENST00000488852 NISCHQ9Y2I1 1504 aa23.65■■□□□ 1.38
LINC00635-207ENST00000488852 FOXD1Q16676 465 aa22.61■■□□□ 1.21
LINC00635-207ENST00000488852 PLPPR3Q6T4P5 718 aa21.7■■□□□ 1.06
LINC00635-207ENST00000488852 PPP6R1Q9UPN7 881 aa21.26■□□□□ 0.99
LINC00635-207ENST00000488852 ADRA2BP18089 450 aa21.2■□□□□ 0.98
LINC00635-207ENST00000488852 PIAS4Q8N2W9 510 aaPredicted RBP21.14■□□□□ 0.97
LINC00635-207ENST00000488852 MSH5O43196 834 aa21.05■□□□□ 0.96
LINC00635-207ENST00000488852 CCDC180Q9P1Z9 1646 aa20.81■□□□□ 0.92
LINC00635-207ENST00000488852 POTEDQ86YR6 584 aa20.42■□□□□ 0.86
LINC00635-207ENST00000488852 ABCC9O60706 1549 aa19.88■□□□□ 0.77
LINC00635-207ENST00000488852 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
LINC00635-207ENST00000488852 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
LINC00635-207ENST00000488852 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
LINC00635-207ENST00000488852 MAPK8IP2Q13387 824 aaPredicted RBP19.46■□□□□ 0.71
LINC00635-207ENST00000488852 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
LINC00635-207ENST00000488852 NACADO15069 1562 aa19.44■□□□□ 0.7
LINC00635-207ENST00000488852 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
LINC00635-207ENST00000488852 SCAF1Q9H7N4 1312 aaKnown RBP19.32■□□□□ 0.68
LINC00635-207ENST00000488852 DMRT2Q9Y5R5 561 aa19.22■□□□□ 0.67
LINC00635-207ENST00000488852 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
LINC00635-207ENST00000488852 SHROOM4Q9ULL8 1493 aa19.06■□□□□ 0.64
LINC00635-207ENST00000488852 PPP4R3CPQ6ZMV5 832 aa19.06■□□□□ 0.64
LINC00635-207ENST00000488852 UNC13AQ9UPW8 1703 aa18.91■□□□□ 0.62
LINC00635-207ENST00000488852 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
LINC00635-207ENST00000488852 PABPN1Q86U42 306 aaKnown RBP eCLIP18.66■□□□□ 0.58
LINC00635-207ENST00000488852 CNKSR2Q8WXI2 1034 aa18.65■□□□□ 0.58
LINC00635-207ENST00000488852 HOXD11P31277 338 aaPredicted RBP18.55■□□□□ 0.56
LINC00635-207ENST00000488852 DCAF8L1A6NGE4 600 aa18.51■□□□□ 0.55
LINC00635-207ENST00000488852 RNF216Q9NWF9 866 aaPredicted RBP18.45■□□□□ 0.54
LINC00635-207ENST00000488852 CECR2Q9BXF3 1484 aa18.38■□□□□ 0.53
LINC00635-207ENST00000488852 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.52
LINC00635-207ENST00000488852 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
LINC00635-207ENST00000488852 SMARCA4P51532 1647 aa18.26■□□□□ 0.51
LINC00635-207ENST00000488852 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
LINC00635-207ENST00000488852 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
LINC00635-207ENST00000488852 SUPT5HO00267 1087 aaKnown RBP18.2■□□□□ 0.5
LINC00635-207ENST00000488852 EIF4G1Q04637 1599 aaKnown RBP18.2■□□□□ 0.5
LINC00635-207ENST00000488852 NPM3O75607 178 aaKnown RBP18.1■□□□□ 0.49
LINC00635-207ENST00000488852 WIZO95785 1651 aa18.09■□□□□ 0.49
LINC00635-207ENST00000488852 CACNB1Q02641 598 aaPredicted RBP18.06■□□□□ 0.48
LINC00635-207ENST00000488852 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
LINC00635-207ENST00000488852 SMARCA2P51531 1590 aa18.03■□□□□ 0.48
LINC00635-207ENST00000488852 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
LINC00635-207ENST00000488852 RNF39Q9H2S5 420 aa18■□□□□ 0.47
LINC00635-207ENST00000488852 CC2D2AQ9P2K1 1620 aa18■□□□□ 0.47
LINC00635-207ENST00000488852 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
LINC00635-207ENST00000488852 BAZ1BQ9UIG0 1483 aaKnown RBP17.92■□□□□ 0.46
LINC00635-207ENST00000488852 NCAPD3P42695 1498 aa17.91■□□□□ 0.46
LINC00635-207ENST00000488852 HMGXB3Q12766 1538 aa17.88■□□□□ 0.45
LINC00635-207ENST00000488852 KCNA4P22459 653 aa17.87■□□□□ 0.45
LINC00635-207ENST00000488852 DNAJC5BQ9UF47 199 aa17.82■□□□□ 0.44
LINC00635-207ENST00000488852 C1QBPQ07021 282 aaKnown RBP17.72■□□□□ 0.43
LINC00635-207ENST00000488852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.72■□□□□ 0.43
LINC00635-207ENST00000488852 CCDC88BA6NC98 1476 aa17.7■□□□□ 0.42
LINC00635-207ENST00000488852 CFTRP13569 1480 aa17.43■□□□□ 0.38
LINC00635-207ENST00000488852 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
LINC00635-207ENST00000488852 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
LINC00635-207ENST00000488852 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
LINC00635-207ENST00000488852 U3KPZ7 1027 aaPredicted RBP17.35■□□□□ 0.37
LINC00635-207ENST00000488852 NESP48681 1621 aa17.35■□□□□ 0.37
LINC00635-207ENST00000488852 SLC4A2P04920 1241 aa17.26■□□□□ 0.35
LINC00635-207ENST00000488852 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
LINC00635-207ENST00000488852 PDS5BQ9NTI5 1447 aa17.24■□□□□ 0.35
LINC00635-207ENST00000488852 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
LINC00635-207ENST00000488852 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
LINC00635-207ENST00000488852 WRNQ14191 1432 aaPredicted RBP eCLIP17.18■□□□□ 0.34
LINC00635-207ENST00000488852 KIF21AQ7Z4S6 1674 aa17.17■□□□□ 0.34
LINC00635-207ENST00000488852 TRIM41Q8WV44 630 aa17.15■□□□□ 0.34
LINC00635-207ENST00000488852 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
LINC00635-207ENST00000488852 ERCC6Q03468 1493 aa17.11■□□□□ 0.33
LINC00635-207ENST00000488852 SPINK5Q9NQ38 1064 aaPredicted RBP17.1■□□□□ 0.33
LINC00635-207ENST00000488852 CUX1P39880 1505 aa17.09■□□□□ 0.33
LINC00635-207ENST00000488852 TOP2BQ02880 1626 aa17.08■□□□□ 0.32
LINC00635-207ENST00000488852 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
LINC00635-207ENST00000488852 CAPN15O75808 1086 aa17.06■□□□□ 0.32
LINC00635-207ENST00000488852 DNMBPQ6XZF7 1577 aa17.06■□□□□ 0.32
LINC00635-207ENST00000488852 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
LINC00635-207ENST00000488852 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
LINC00635-207ENST00000488852 TOPBP1Q92547 1522 aa17.03■□□□□ 0.32
LINC00635-207ENST00000488852 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
LINC00635-207ENST00000488852 WDR62O43379 1518 aa16.96■□□□□ 0.31
LINC00635-207ENST00000488852 FGD5Q6ZNL6 1462 aa16.96■□□□□ 0.31
LINC00635-207ENST00000488852 POLA1P09884 1462 aaPredicted RBP16.92■□□□□ 0.3
LINC00635-207ENST00000488852 DSG3P32926 999 aa16.91■□□□□ 0.3
LINC00635-207ENST00000488852 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
LINC00635-207ENST00000488852 SOGA1O94964 1423 aa16.86■□□□□ 0.29
LINC00635-207ENST00000488852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.84■□□□□ 0.29
LINC00635-207ENST00000488852 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
LINC00635-207ENST00000488852 RAD54L2Q9Y4B4 1467 aa16.84■□□□□ 0.29
LINC00635-207ENST00000488852 TRHP20396 242 aaPredicted RBP16.83■□□□□ 0.28
LINC00635-207ENST00000488852 APLP2Q06481 763 aa16.81■□□□□ 0.28
LINC00635-207ENST00000488852 ABCA10Q8WWZ4 1543 aa16.8■□□□□ 0.28
LINC00635-207ENST00000488852 CUX2O14529 1486 aa16.8■□□□□ 0.28
LINC00635-207ENST00000488852 EEA1Q15075 1411 aa16.8■□□□□ 0.28
LINC00635-207ENST00000488852 FAM9AQ8IZU1 332 aaPredicted RBP16.8■□□□□ 0.28
LINC00635-207ENST00000488852 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms