RNA–Protein interactions for RNA: ENST00000444002.3

AP001885.1-202, humanhuman

BASIC

Gene AP001885.1, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001885.1-202ENST00000444002 AEBP2Q6ZN18 517 aaPredicted RBP31.74■■■□□ 2.67
AP001885.1-202ENST00000444002 CHIC1Q5VXU3 224 aa29.47■■■□□ 2.31
AP001885.1-202ENST00000444002 SENP3Q9H4L4 574 aaPredicted RBP26.98■■□□□ 1.91
AP001885.1-202ENST00000444002 PHF23Q9BUL5 403 aaPredicted RBP26.6■■□□□ 1.85
AP001885.1-202ENST00000444002 FOXD1Q16676 465 aa25.33■■□□□ 1.65
AP001885.1-202ENST00000444002 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
AP001885.1-202ENST00000444002 POTEDQ86YR6 584 aa24.35■■□□□ 1.49
AP001885.1-202ENST00000444002 MSH5O43196 834 aa23.81■■□□□ 1.4
AP001885.1-202ENST00000444002 PIAS4Q8N2W9 510 aaPredicted RBP23.41■■□□□ 1.34
AP001885.1-202ENST00000444002 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
AP001885.1-202ENST00000444002 PLPPR3Q6T4P5 718 aa23.18■■□□□ 1.3
AP001885.1-202ENST00000444002 ADRA2BP18089 450 aa23.09■■□□□ 1.29
AP001885.1-202ENST00000444002 CCDC180Q9P1Z9 1646 aa22.05■■□□□ 1.12
AP001885.1-202ENST00000444002 ABCC9O60706 1549 aa22.01■■□□□ 1.11
AP001885.1-202ENST00000444002 MAPK8IP2Q13387 824 aaPredicted RBP21.42■■□□□ 1.02
AP001885.1-202ENST00000444002 DMRT2Q9Y5R5 561 aa21.37■■□□□ 1.01
AP001885.1-202ENST00000444002 RB1CC1Q8TDY2 1594 aa20.98■□□□□ 0.95
AP001885.1-202ENST00000444002 SCAF1Q9H7N4 1312 aaKnown RBP20.96■□□□□ 0.95
AP001885.1-202ENST00000444002 NACADO15069 1562 aa20.83■□□□□ 0.92
AP001885.1-202ENST00000444002 CACNB1Q02641 598 aaPredicted RBP20.75■□□□□ 0.91
AP001885.1-202ENST00000444002 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
AP001885.1-202ENST00000444002 DNAJC5BQ9UF47 199 aa20.57■□□□□ 0.88
AP001885.1-202ENST00000444002 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
AP001885.1-202ENST00000444002 UNC13AQ9UPW8 1703 aa20.5■□□□□ 0.87
AP001885.1-202ENST00000444002 PABPN1Q86U42 306 aaKnown RBP eCLIP20.46■□□□□ 0.87
AP001885.1-202ENST00000444002 HOXD11P31277 338 aaPredicted RBP20.39■□□□□ 0.85
AP001885.1-202ENST00000444002 RNF39Q9H2S5 420 aa20.36■□□□□ 0.85
AP001885.1-202ENST00000444002 ZCCHC6Q5VYS8 1495 aaKnown RBP20.34■□□□□ 0.85
AP001885.1-202ENST00000444002 DCAF8L1A6NGE4 600 aa20.33■□□□□ 0.85
AP001885.1-202ENST00000444002 BICRAQ9NZM4 1560 aa20.33■□□□□ 0.84
AP001885.1-202ENST00000444002 PPP4R3CPQ6ZMV5 832 aa20.29■□□□□ 0.84
AP001885.1-202ENST00000444002 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.84
AP001885.1-202ENST00000444002 SHROOM4Q9ULL8 1493 aa20.1■□□□□ 0.81
AP001885.1-202ENST00000444002 SCRIBQ14160 1630 aa20.08■□□□□ 0.8
AP001885.1-202ENST00000444002 RNF216Q9NWF9 866 aaPredicted RBP20.02■□□□□ 0.8
AP001885.1-202ENST00000444002 CNKSR2Q8WXI2 1034 aa20.01■□□□□ 0.79
AP001885.1-202ENST00000444002 C1QBPQ07021 282 aaKnown RBP19.94■□□□□ 0.78
AP001885.1-202ENST00000444002 CC2D2AQ9P2K1 1620 aa19.89■□□□□ 0.77
AP001885.1-202ENST00000444002 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
AP001885.1-202ENST00000444002 CECR2Q9BXF3 1484 aa19.82■□□□□ 0.76
AP001885.1-202ENST00000444002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.25■□□□□ 0.67
AP001885.1-202ENST00000444002 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
AP001885.1-202ENST00000444002 NCAPD3P42695 1498 aa19.2■□□□□ 0.66
AP001885.1-202ENST00000444002 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
AP001885.1-202ENST00000444002 ATAD2BQ9ULI0 1458 aa19.15■□□□□ 0.66
AP001885.1-202ENST00000444002 SMARCA2P51531 1590 aa19.13■□□□□ 0.65
AP001885.1-202ENST00000444002 NPM3O75607 178 aaKnown RBP19.09■□□□□ 0.65
AP001885.1-202ENST00000444002 HMGXB3Q12766 1538 aa19.09■□□□□ 0.65
AP001885.1-202ENST00000444002 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
AP001885.1-202ENST00000444002 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
AP001885.1-202ENST00000444002 BAZ1BQ9UIG0 1483 aaKnown RBP18.99■□□□□ 0.63
AP001885.1-202ENST00000444002 CUX2O14529 1486 aa18.98■□□□□ 0.63
AP001885.1-202ENST00000444002 PEG3Q9GZU2 1588 aa18.95■□□□□ 0.62
AP001885.1-202ENST00000444002 U3KPZ7 1027 aaPredicted RBP18.94■□□□□ 0.62
AP001885.1-202ENST00000444002 POTEHQ6S545 545 aa18.91■□□□□ 0.62
AP001885.1-202ENST00000444002 DNAJC5Q9H3Z4 198 aa18.91■□□□□ 0.62
AP001885.1-202ENST00000444002 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.62
AP001885.1-202ENST00000444002 NESP48681 1621 aa18.89■□□□□ 0.62
AP001885.1-202ENST00000444002 DSG3P32926 999 aa18.86■□□□□ 0.61
AP001885.1-202ENST00000444002 SPINK5Q9NQ38 1064 aaPredicted RBP18.83■□□□□ 0.6
AP001885.1-202ENST00000444002 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
AP001885.1-202ENST00000444002 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
AP001885.1-202ENST00000444002 WIZO95785 1651 aa18.69■□□□□ 0.58
AP001885.1-202ENST00000444002 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
AP001885.1-202ENST00000444002 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
AP001885.1-202ENST00000444002 CAPN15O75808 1086 aa18.68■□□□□ 0.58
AP001885.1-202ENST00000444002 CADPSQ9ULU8 1353 aa18.62■□□□□ 0.57
AP001885.1-202ENST00000444002 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.55
AP001885.1-202ENST00000444002 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
AP001885.1-202ENST00000444002 WDR62O43379 1518 aa18.47■□□□□ 0.55
AP001885.1-202ENST00000444002 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.55
AP001885.1-202ENST00000444002 TOP2AP11388 1531 aaKnown RBP18.45■□□□□ 0.54
AP001885.1-202ENST00000444002 SLC4A2P04920 1241 aa18.45■□□□□ 0.54
AP001885.1-202ENST00000444002 FANCD2Q9BXW9 1451 aa18.43■□□□□ 0.54
AP001885.1-202ENST00000444002 CFTRP13569 1480 aa18.41■□□□□ 0.54
AP001885.1-202ENST00000444002 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
AP001885.1-202ENST00000444002 ABCB7O75027 752 aa18.27■□□□□ 0.52
AP001885.1-202ENST00000444002 URB2Q14146 1524 aaKnown RBP18.26■□□□□ 0.51
AP001885.1-202ENST00000444002 TRHP20396 242 aaPredicted RBP18.25■□□□□ 0.51
AP001885.1-202ENST00000444002 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
AP001885.1-202ENST00000444002 ZNF219Q9P2Y4 722 aaPredicted RBP18.21■□□□□ 0.51
AP001885.1-202ENST00000444002 KCNA4P22459 653 aa18.2■□□□□ 0.5
AP001885.1-202ENST00000444002 APLP2Q06481 763 aa18.11■□□□□ 0.49
AP001885.1-202ENST00000444002 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
AP001885.1-202ENST00000444002 OSCARQ8IYS5 282 aa18.1■□□□□ 0.49
AP001885.1-202ENST00000444002 TOPBP1Q92547 1522 aa18.08■□□□□ 0.48
AP001885.1-202ENST00000444002 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
AP001885.1-202ENST00000444002 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
AP001885.1-202ENST00000444002 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
AP001885.1-202ENST00000444002 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
AP001885.1-202ENST00000444002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
AP001885.1-202ENST00000444002 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
AP001885.1-202ENST00000444002 EIF4G3O43432 1585 aaKnown RBP17.96■□□□□ 0.47
AP001885.1-202ENST00000444002 SAMD1Q6SPF0 538 aaPredicted RBP17.92■□□□□ 0.46
AP001885.1-202ENST00000444002 TARBP1Q13395 1621 aaKnown RBP17.91■□□□□ 0.46
AP001885.1-202ENST00000444002 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
AP001885.1-202ENST00000444002 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
AP001885.1-202ENST00000444002 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
AP001885.1-202ENST00000444002 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
AP001885.1-202ENST00000444002 RBM42Q9BTD8 480 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms