Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.36■■□□□ 1.17
UBQLN1Q9UMX0 AL138781.1-201ENST00000566567 1274 ntBASIC22.36■■□□□ 1.17
UBQLN1Q9UMX0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.36■■□□□ 1.17
UBQLN1Q9UMX0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
UBQLN1Q9UMX0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
UBQLN1Q9UMX0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
UBQLN1Q9UMX0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
UBQLN1Q9UMX0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
UBQLN1Q9UMX0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 AC010980.2-201ENST00000587099 1412 ntBASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBQLN1Q9UMX0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 MIPEPP3-201ENST00000412105 444 ntBASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.34■■□□□ 1.17
UBQLN1Q9UMX0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
UBQLN1Q9UMX0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
UBQLN1Q9UMX0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
UBQLN1Q9UMX0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
UBQLN1Q9UMX0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.33■■□□□ 1.17
UBQLN1Q9UMX0 AC116050.2-201ENST00000612102 1779 ntBASIC22.33■■□□□ 1.17
UBQLN1Q9UMX0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
UBQLN1Q9UMX0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.33■■□□□ 1.17
UBQLN1Q9UMX0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
UBQLN1Q9UMX0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
UBQLN1Q9UMX0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.33■■□□□ 1.16
UBQLN1Q9UMX0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.33■■□□□ 1.16
UBQLN1Q9UMX0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
UBQLN1Q9UMX0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.33■■□□□ 1.16
UBQLN1Q9UMX0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
UBQLN1Q9UMX0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 AC100791.3-201ENST00000617619 330 ntBASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
UBQLN1Q9UMX0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 AC073210.2-201ENST00000430369 194 ntBASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 AC069152.1-201ENST00000438030 544 ntBASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 MIR4758-201ENST00000577688 71 ntBASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 AC133041.1-202ENST00000642053 222 ntBASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.31■■□□□ 1.16
UBQLN1Q9UMX0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.3■■□□□ 1.16
UBQLN1Q9UMX0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBQLN1Q9UMX0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
UBQLN1Q9UMX0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
UBQLN1Q9UMX0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBQLN1Q9UMX0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBQLN1Q9UMX0 BX276092.2-201ENST00000417668 665 ntBASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms