Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 AC073314.1-201ENST00000568729 2216 ntBASIC19.34■□□□□ 0.69
RLIMQ9NVW2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RLIMQ9NVW2 PLK5-205ENST00000642079 1969 ntBASIC19.33■□□□□ 0.69
RLIMQ9NVW2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RLIMQ9NVW2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RLIMQ9NVW2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
RLIMQ9NVW2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.33■□□□□ 0.69
RLIMQ9NVW2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RLIMQ9NVW2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RLIMQ9NVW2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RLIMQ9NVW2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RLIMQ9NVW2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
RLIMQ9NVW2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RLIMQ9NVW2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RLIMQ9NVW2 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.33■□□□□ 0.68
RLIMQ9NVW2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RLIMQ9NVW2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.33■□□□□ 0.68
RLIMQ9NVW2 TPRG1LP1-201ENST00000598702 760 ntBASIC19.33■□□□□ 0.68
RLIMQ9NVW2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.33■□□□□ 0.68
RLIMQ9NVW2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RLIMQ9NVW2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RLIMQ9NVW2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RLIMQ9NVW2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RLIMQ9NVW2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RLIMQ9NVW2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RLIMQ9NVW2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RLIMQ9NVW2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RLIMQ9NVW2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 AL391422.3-201ENST00000603791 2761 ntBASIC19.32■□□□□ 0.68
RLIMQ9NVW2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 AL358852.1-201ENST00000623174 1268 ntBASIC19.32■□□□□ 0.68
RLIMQ9NVW2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 AP005212.1-201ENST00000581547 1997 ntBASIC19.32■□□□□ 0.68
RLIMQ9NVW2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RLIMQ9NVW2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 IRS3P-201ENST00000223076 1006 ntBASIC19.31■□□□□ 0.68
RLIMQ9NVW2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RLIMQ9NVW2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 AC006128.1-201ENST00000624704 1661 ntBASIC19.3■□□□□ 0.68
RLIMQ9NVW2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.3■□□□□ 0.68
RLIMQ9NVW2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RLIMQ9NVW2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
RLIMQ9NVW2 GABARAPL3-202ENST00000624044 1851 ntBASIC19.29■□□□□ 0.68
RLIMQ9NVW2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RLIMQ9NVW2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.29■□□□□ 0.68
RLIMQ9NVW2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.29■□□□□ 0.68
RLIMQ9NVW2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
RLIMQ9NVW2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.29■□□□□ 0.68
RLIMQ9NVW2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RLIMQ9NVW2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RLIMQ9NVW2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms