Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 AL356441.2-201ENST00000443009 864 ntBASIC19.69■□□□□ 0.74
NANOGQ9H9S0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NANOGQ9H9S0 AC055733.4-201ENST00000638462 1354 ntBASIC19.69■□□□□ 0.74
NANOGQ9H9S0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NANOGQ9H9S0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
NANOGQ9H9S0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NANOGQ9H9S0 AL162377.1-201ENST00000618844 1793 ntBASIC19.68■□□□□ 0.74
NANOGQ9H9S0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NANOGQ9H9S0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NANOGQ9H9S0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.68■□□□□ 0.74
NANOGQ9H9S0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NANOGQ9H9S0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.68■□□□□ 0.74
NANOGQ9H9S0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
NANOGQ9H9S0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.68■□□□□ 0.74
NANOGQ9H9S0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.68■□□□□ 0.74
NANOGQ9H9S0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NANOGQ9H9S0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NANOGQ9H9S0 AC009237.3-201ENST00000393279 1427 ntBASIC19.68■□□□□ 0.74
NANOGQ9H9S0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 FP700111.2-201ENST00000619190 1892 ntBASIC19.67■□□□□ 0.74
NANOGQ9H9S0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 AL512408.1-201ENST00000569378 2000 ntBASIC19.67■□□□□ 0.74
NANOGQ9H9S0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 AC112907.3-201ENST00000577781 2400 ntBASIC19.67■□□□□ 0.74
NANOGQ9H9S0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NANOGQ9H9S0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.66■□□□□ 0.74
NANOGQ9H9S0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NANOGQ9H9S0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms