Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CDT1Q9H211 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDT1Q9H211 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.61■■□□□ 1.21
CDT1Q9H211 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.61■■□□□ 1.21
CDT1Q9H211 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDT1Q9H211 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
CDT1Q9H211 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.61■■□□□ 1.21
CDT1Q9H211 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDT1Q9H211 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CDT1Q9H211 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDT1Q9H211 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
CDT1Q9H211 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDT1Q9H211 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CDT1Q9H211 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDT1Q9H211 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
CDT1Q9H211 SLC29A4P1-201ENST00000398760 971 ntBASIC22.6■■□□□ 1.21
CDT1Q9H211 AL512625.2-201ENST00000417533 625 ntBASIC22.6■■□□□ 1.21
CDT1Q9H211 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDT1Q9H211 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.6■■□□□ 1.21
CDT1Q9H211 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.6■■□□□ 1.21
CDT1Q9H211 AL138781.1-201ENST00000566567 1274 ntBASIC22.6■■□□□ 1.21
CDT1Q9H211 AC142086.2-201ENST00000569753 217 ntBASIC22.6■■□□□ 1.21
CDT1Q9H211 FAM21FP-204ENST00000608637 956 ntBASIC22.6■■□□□ 1.21
CDT1Q9H211 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDT1Q9H211 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDT1Q9H211 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.6■■□□□ 1.21
CDT1Q9H211 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
CDT1Q9H211 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDT1Q9H211 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.6■■□□□ 1.21
CDT1Q9H211 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDT1Q9H211 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDT1Q9H211 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDT1Q9H211 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDT1Q9H211 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDT1Q9H211 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDT1Q9H211 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDT1Q9H211 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDT1Q9H211 MKRN4P-201ENST00000444706 1521 ntBASIC22.59■■□□□ 1.21
CDT1Q9H211 CDV3P1-201ENST00000471403 739 ntBASIC22.59■■□□□ 1.21
CDT1Q9H211 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.59■■□□□ 1.21
CDT1Q9H211 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.59■■□□□ 1.21
CDT1Q9H211 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.59■■□□□ 1.21
CDT1Q9H211 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.59■■□□□ 1.21
CDT1Q9H211 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDT1Q9H211 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CDT1Q9H211 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CDT1Q9H211 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDT1Q9H211 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CDT1Q9H211 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDT1Q9H211 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
CDT1Q9H211 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.59■■□□□ 1.21
CDT1Q9H211 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDT1Q9H211 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
CDT1Q9H211 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDT1Q9H211 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDT1Q9H211 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.58■■□□□ 1.21
CDT1Q9H211 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.58■■□□□ 1.21
CDT1Q9H211 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.21
CDT1Q9H211 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CDT1Q9H211 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDT1Q9H211 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDT1Q9H211 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDT1Q9H211 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDT1Q9H211 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
CDT1Q9H211 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDT1Q9H211 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDT1Q9H211 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
CDT1Q9H211 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.57■■□□□ 1.2
CDT1Q9H211 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CDT1Q9H211 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDT1Q9H211 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.57■■□□□ 1.2
CDT1Q9H211 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.57■■□□□ 1.2
CDT1Q9H211 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDT1Q9H211 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.57■■□□□ 1.2
CDT1Q9H211 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CDT1Q9H211 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.57■■□□□ 1.2
CDT1Q9H211 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.57■■□□□ 1.2
CDT1Q9H211 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDT1Q9H211 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CDT1Q9H211 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDT1Q9H211 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.56■■□□□ 1.2
CDT1Q9H211 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDT1Q9H211 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.56■■□□□ 1.2
CDT1Q9H211 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDT1Q9H211 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDT1Q9H211 AC007322.3-201ENST00000426526 701 ntBASIC22.56■■□□□ 1.2
CDT1Q9H211 AC098934.4-201ENST00000564127 592 ntBASIC22.56■■□□□ 1.2
CDT1Q9H211 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.56■■□□□ 1.2
CDT1Q9H211 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.56■■□□□ 1.2
CDT1Q9H211 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.56■■□□□ 1.2
CDT1Q9H211 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDT1Q9H211 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.56■■□□□ 1.2
CDT1Q9H211 AC010980.2-201ENST00000587099 1412 ntBASIC22.56■■□□□ 1.2
CDT1Q9H211 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.55■■□□□ 1.2
CDT1Q9H211 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDT1Q9H211 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDT1Q9H211 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CDT1Q9H211 AL024507.2-201ENST00000606070 2574 ntBASIC22.55■■□□□ 1.2
CDT1Q9H211 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDT1Q9H211 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms