Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 AC008894.3-201ENST00000624324 3103 ntBASIC12.19□□□□□ -0.46
RPS28P62857 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RPS28P62857 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RPS28P62857 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
RPS28P62857 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC12.18□□□□□ -0.46
RPS28P62857 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.18□□□□□ -0.46
RPS28P62857 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
RPS28P62857 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12.18□□□□□ -0.46
RPS28P62857 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
RPS28P62857 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 HCG11-201ENST00000411553 5696 ntBASIC12.18□□□□□ -0.46
RPS28P62857 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.18□□□□□ -0.46
RPS28P62857 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC12.18□□□□□ -0.46
RPS28P62857 PALM-207ENST00000590161 2137 ntTSL 4 BASIC12.18□□□□□ -0.46
RPS28P62857 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.18□□□□□ -0.46
RPS28P62857 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RPS28P62857 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RPS28P62857 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.18□□□□□ -0.46
RPS28P62857 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RPS28P62857 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC12.18□□□□□ -0.46
RPS28P62857 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPS28P62857 AC068418.2-201ENST00000577309 3703 ntBASIC12.18□□□□□ -0.46
RPS28P62857 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.17□□□□□ -0.46
RPS28P62857 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RPS28P62857 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC12.17□□□□□ -0.46
RPS28P62857 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.17□□□□□ -0.46
RPS28P62857 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.17□□□□□ -0.46
RPS28P62857 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RPS28P62857 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
RPS28P62857 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RPS28P62857 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RPS28P62857 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
RPS28P62857 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RPS28P62857 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.16□□□□□ -0.46
RPS28P62857 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC12.16□□□□□ -0.46
RPS28P62857 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.16□□□□□ -0.46
RPS28P62857 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
RPS28P62857 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC12.16□□□□□ -0.46
RPS28P62857 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
RPS28P62857 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.16□□□□□ -0.46
RPS28P62857 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
RPS28P62857 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RPS28P62857 MKRN4P-201ENST00000444706 1521 ntBASIC12.16□□□□□ -0.46
RPS28P62857 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPS28P62857 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms