Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TSPAN3O60637 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
TSPAN3O60637 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TSPAN3O60637 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TSPAN3O60637 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TSPAN3O60637 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TSPAN3O60637 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.45■■□□□ 1.02
TSPAN3O60637 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.45■■□□□ 1.02
TSPAN3O60637 OR10C1-204ENST00000622521 1039 ntBASIC21.45■■□□□ 1.02
TSPAN3O60637 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.45■■□□□ 1.02
TSPAN3O60637 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TSPAN3O60637 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.45■■□□□ 1.02
TSPAN3O60637 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TSPAN3O60637 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.45■■□□□ 1.02
TSPAN3O60637 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.44■■□□□ 1.02
TSPAN3O60637 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.44■■□□□ 1.02
TSPAN3O60637 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN3O60637 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.44■■□□□ 1.02
TSPAN3O60637 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN3O60637 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN3O60637 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN3O60637 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN3O60637 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN3O60637 MKRN4P-201ENST00000444706 1521 ntBASIC21.44■■□□□ 1.02
TSPAN3O60637 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN3O60637 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
TSPAN3O60637 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSPAN3O60637 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.43■■□□□ 1.02
TSPAN3O60637 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.43■■□□□ 1.02
TSPAN3O60637 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TSPAN3O60637 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSPAN3O60637 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.43■■□□□ 1.02
TSPAN3O60637 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.43■■□□□ 1.02
TSPAN3O60637 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.43■■□□□ 1.02
TSPAN3O60637 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
TSPAN3O60637 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSPAN3O60637 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TSPAN3O60637 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.43■■□□□ 1.02
TSPAN3O60637 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSPAN3O60637 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSPAN3O60637 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.43■■□□□ 1.02
TSPAN3O60637 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TSPAN3O60637 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.42■■□□□ 1.02
TSPAN3O60637 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN3O60637 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN3O60637 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
TSPAN3O60637 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN3O60637 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
TSPAN3O60637 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN3O60637 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN3O60637 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
TSPAN3O60637 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN3O60637 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN3O60637 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.42■■□□□ 1.02
TSPAN3O60637 AC098934.4-201ENST00000564127 592 ntBASIC21.42■■□□□ 1.02
TSPAN3O60637 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.42■■□□□ 1.02
TSPAN3O60637 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN3O60637 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN3O60637 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN3O60637 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TSPAN3O60637 AC244015.2-201ENST00000616358 1861 ntBASIC21.41■■□□□ 1.02
TSPAN3O60637 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN3O60637 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN3O60637 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.41■■□□□ 1.02
TSPAN3O60637 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.41■■□□□ 1.02
TSPAN3O60637 RARRES2P4-201ENST00000514074 484 ntBASIC21.41■■□□□ 1.02
TSPAN3O60637 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN3O60637 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.41■■□□□ 1.02
TSPAN3O60637 AC142086.2-201ENST00000569753 217 ntBASIC21.41■■□□□ 1.02
TSPAN3O60637 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.41■■□□□ 1.02
TSPAN3O60637 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.41■■□□□ 1.02
TSPAN3O60637 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.41■■□□□ 1.02
TSPAN3O60637 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN3O60637 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN3O60637 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN3O60637 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN3O60637 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN3O60637 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.4■■□□□ 1.02
TSPAN3O60637 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TSPAN3O60637 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN3O60637 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN3O60637 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TSPAN3O60637 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.4■■□□□ 1.02
TSPAN3O60637 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN3O60637 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.4■■□□□ 1.02
TSPAN3O60637 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.4■■□□□ 1.02
TSPAN3O60637 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN3O60637 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN3O60637 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN3O60637 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.4■■□□□ 1.02
TSPAN3O60637 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
TSPAN3O60637 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
TSPAN3O60637 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.39■■□□□ 1.02
TSPAN3O60637 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
TSPAN3O60637 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TSPAN3O60637 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TSPAN3O60637 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.39■■□□□ 1.01
TSPAN3O60637 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TSPAN3O60637 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TSPAN3O60637 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms