Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
TO15178 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TO15178 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.18■□□□□ 0.66
TO15178 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.18■□□□□ 0.66
TO15178 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TO15178 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TO15178 AC007322.4-201ENST00000509611 723 ntBASIC19.18■□□□□ 0.66
TO15178 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
TO15178 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TO15178 AC013268.1-206ENST00000638368 961 ntBASIC19.18■□□□□ 0.66
TO15178 AC112229.1-201ENST00000639295 961 ntBASIC19.18■□□□□ 0.66
TO15178 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.18■□□□□ 0.66
TO15178 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TO15178 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TO15178 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TO15178 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TO15178 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.18■□□□□ 0.66
TO15178 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TO15178 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.17■□□□□ 0.66
TO15178 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TO15178 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TO15178 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TO15178 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TO15178 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TO15178 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.17■□□□□ 0.66
TO15178 AC004911.1-201ENST00000416316 871 ntBASIC19.17■□□□□ 0.66
TO15178 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.17■□□□□ 0.66
TO15178 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.17■□□□□ 0.66
TO15178 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.17■□□□□ 0.66
TO15178 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.17■□□□□ 0.66
TO15178 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.17■□□□□ 0.66
TO15178 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TO15178 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TO15178 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TO15178 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
TO15178 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.16■□□□□ 0.66
TO15178 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.16■□□□□ 0.66
TO15178 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
TO15178 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.16■□□□□ 0.66
TO15178 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TO15178 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.16■□□□□ 0.66
TO15178 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TO15178 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TO15178 AC091799.1-201ENST00000422823 811 ntBASIC19.16■□□□□ 0.66
TO15178 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.16■□□□□ 0.66
TO15178 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TO15178 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TO15178 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TO15178 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.16■□□□□ 0.66
TO15178 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.16■□□□□ 0.66
TO15178 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TO15178 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TO15178 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TO15178 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TO15178 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.15■□□□□ 0.66
TO15178 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TO15178 CNN2P6-201ENST00000439038 900 ntBASIC19.15■□□□□ 0.66
TO15178 AC080038.1-201ENST00000611274 1154 ntBASIC19.15■□□□□ 0.66
TO15178 AC231657.2-201ENST00000624556 255 ntBASIC19.15■□□□□ 0.66
TO15178 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TO15178 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TO15178 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.15■□□□□ 0.66
TO15178 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TO15178 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TO15178 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TO15178 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
TO15178 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TO15178 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TO15178 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.14■□□□□ 0.66
TO15178 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TO15178 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TO15178 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TO15178 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TO15178 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TO15178 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TO15178 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TO15178 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.14■□□□□ 0.65
TO15178 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.14■□□□□ 0.65
TO15178 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.14■□□□□ 0.65
TO15178 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.14■□□□□ 0.65
TO15178 AL162412.1-201ENST00000567129 965 ntBASIC19.14■□□□□ 0.65
TO15178 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TO15178 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TO15178 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TO15178 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TO15178 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TO15178 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.13■□□□□ 0.65
TO15178 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TO15178 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.13■□□□□ 0.65
TO15178 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.13■□□□□ 0.65
TO15178 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TO15178 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TO15178 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.13■□□□□ 0.65
TO15178 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TO15178 AC007375.3-201ENST00000600936 2314 ntBASIC19.13■□□□□ 0.65
TO15178 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TO15178 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TO15178 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TO15178 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TO15178 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms