Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 AL356309.3-201ENST00000624132 1934 ntBASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 AL133380.1-201ENST00000506013 324 ntBASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01558Q9Y6Z2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 AL139384.1-201ENST00000612143 3047 ntBASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01558Q9Y6Z2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 AC110285.7-201ENST00000624417 1536 ntBASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms