Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 GABARAPL3-202ENST00000624044 1851 ntBASIC23.7■■□□□ 1.38
PCDHA7Q9UN72 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA7Q9UN72 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.38
PCDHA7Q9UN72 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA7Q9UN72 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA7Q9UN72 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 AL354811.1-201ENST00000610286 706 ntBASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHA7Q9UN72 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 AC007225.1-201ENST00000566331 1836 ntBASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA7Q9UN72 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 AC027702.1-201ENST00000563810 1770 ntBASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 MIR6084-201ENST00000622012 110 ntBASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA7Q9UN72 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PCDHA7Q9UN72 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHA7Q9UN72 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHA7Q9UN72 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA7Q9UN72 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PCDHA7Q9UN72 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.65■■□□□ 1.38
PCDHA7Q9UN72 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA7Q9UN72 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA7Q9UN72 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
PCDHA7Q9UN72 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
PCDHA7Q9UN72 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA7Q9UN72 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHA7Q9UN72 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
PCDHA7Q9UN72 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
PCDHA7Q9UN72 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.64■■□□□ 1.38
PCDHA7Q9UN72 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
PCDHA7Q9UN72 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHA7Q9UN72 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHA7Q9UN72 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms