Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 AC087393.1-201ENST00000582896 145 ntBASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 AC018755.3-202ENST00000596210 929 ntBASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.46■□□□□ 0.71
VCX3AQ9NNX9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 ZNRF2P2-203ENST00000454624 420 ntBASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3AQ9NNX9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 MIR3648-2-201ENST00000581792 180 ntBASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 MIR3648-1-201ENST00000615959 180 ntBASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3AQ9NNX9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3AQ9NNX9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3AQ9NNX9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 AC073314.1-201ENST00000568729 2216 ntBASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms