Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF38Q9H0F5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF38Q9H0F5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF38Q9H0F5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF38Q9H0F5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF38Q9H0F5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF38Q9H0F5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RNF38Q9H0F5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF38Q9H0F5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF38Q9H0F5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RNF38Q9H0F5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF38Q9H0F5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF38Q9H0F5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF38Q9H0F5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF38Q9H0F5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF38Q9H0F5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF38Q9H0F5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RNF38Q9H0F5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF38Q9H0F5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF38Q9H0F5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RNF38Q9H0F5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF38Q9H0F5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF38Q9H0F5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RNF38Q9H0F5 AC092118.2-201ENST00000613495 667 ntBASIC21.66■■□□□ 1.06
RNF38Q9H0F5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RNF38Q9H0F5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RNF38Q9H0F5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF38Q9H0F5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 CLDN5-201ENST00000403084 2357 ntBASIC21.65■■□□□ 1.06
RNF38Q9H0F5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 TSPY20P-201ENST00000450910 630 ntBASIC21.65■■□□□ 1.06
RNF38Q9H0F5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF38Q9H0F5 AL117328.2-201ENST00000624617 1940 ntBASIC21.65■■□□□ 1.06
RNF38Q9H0F5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RNF38Q9H0F5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF38Q9H0F5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF38Q9H0F5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF38Q9H0F5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF38Q9H0F5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF38Q9H0F5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF38Q9H0F5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF38Q9H0F5 MIR4651-201ENST00000582622 73 ntBASIC21.64■■□□□ 1.05
RNF38Q9H0F5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
RNF38Q9H0F5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF38Q9H0F5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF38Q9H0F5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 FAM21FP-204ENST00000608637 956 ntBASIC21.63■■□□□ 1.05
RNF38Q9H0F5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF38Q9H0F5 EP400NL-214ENST00000641289 2402 ntBASIC21.63■■□□□ 1.05
RNF38Q9H0F5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 AL355472.2-201ENST00000422958 438 ntBASIC21.62■■□□□ 1.05
RNF38Q9H0F5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF38Q9H0F5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms