Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 FP700111.2-201ENST00000619190 1892 ntBASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 AL138724.1-201ENST00000606771 1088 ntBASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 AC092171.4-201ENST00000609130 632 ntBASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 AC136469.2-201ENST00000623944 1028 ntBASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC10.56□□□□□ -0.72
KRTAP3-1Q9BYR8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 BX005040.4-201ENST00000637145 1518 ntBASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-1Q9BYR8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 AC133561.4-201ENST00000566112 224 ntBASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms