Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
S1PR3Q99500 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
S1PR3Q99500 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
S1PR3Q99500 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
S1PR3Q99500 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
S1PR3Q99500 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.16■□□□□ 0.34
S1PR3Q99500 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
S1PR3Q99500 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
S1PR3Q99500 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
S1PR3Q99500 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.15■□□□□ 0.34
S1PR3Q99500 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
S1PR3Q99500 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
S1PR3Q99500 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
S1PR3Q99500 AC138932.1-201ENST00000534164 6830 ntBASIC17.15■□□□□ 0.34
S1PR3Q99500 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
S1PR3Q99500 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
S1PR3Q99500 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.15■□□□□ 0.34
S1PR3Q99500 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.15■□□□□ 0.34
S1PR3Q99500 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.15■□□□□ 0.34
S1PR3Q99500 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
S1PR3Q99500 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.15■□□□□ 0.34
S1PR3Q99500 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.15■□□□□ 0.34
S1PR3Q99500 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.15■□□□□ 0.34
S1PR3Q99500 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
S1PR3Q99500 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
S1PR3Q99500 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
S1PR3Q99500 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
S1PR3Q99500 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
S1PR3Q99500 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
S1PR3Q99500 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
S1PR3Q99500 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
S1PR3Q99500 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
S1PR3Q99500 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
S1PR3Q99500 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
S1PR3Q99500 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.14■□□□□ 0.33
S1PR3Q99500 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
S1PR3Q99500 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
S1PR3Q99500 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
S1PR3Q99500 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
S1PR3Q99500 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.14■□□□□ 0.33
S1PR3Q99500 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
S1PR3Q99500 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
S1PR3Q99500 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.14■□□□□ 0.33
S1PR3Q99500 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
S1PR3Q99500 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.14■□□□□ 0.33
S1PR3Q99500 MIR6084-201ENST00000622012 110 ntBASIC17.14■□□□□ 0.33
S1PR3Q99500 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
S1PR3Q99500 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
S1PR3Q99500 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
S1PR3Q99500 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
S1PR3Q99500 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
S1PR3Q99500 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.14■□□□□ 0.33
S1PR3Q99500 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
S1PR3Q99500 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
S1PR3Q99500 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.13■□□□□ 0.33
S1PR3Q99500 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
S1PR3Q99500 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
S1PR3Q99500 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.13■□□□□ 0.33
S1PR3Q99500 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
S1PR3Q99500 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
S1PR3Q99500 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
S1PR3Q99500 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
S1PR3Q99500 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
S1PR3Q99500 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
S1PR3Q99500 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
S1PR3Q99500 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
S1PR3Q99500 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.13■□□□□ 0.33
S1PR3Q99500 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
S1PR3Q99500 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.12■□□□□ 0.33
S1PR3Q99500 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.12■□□□□ 0.33
S1PR3Q99500 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.12■□□□□ 0.33
S1PR3Q99500 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
S1PR3Q99500 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.12■□□□□ 0.33
S1PR3Q99500 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR3Q99500 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR3Q99500 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.11■□□□□ 0.33
S1PR3Q99500 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
S1PR3Q99500 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR3Q99500 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR3Q99500 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR3Q99500 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.11■□□□□ 0.33
S1PR3Q99500 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR3Q99500 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
S1PR3Q99500 AC027612.3-201ENST00000413684 1047 ntBASIC17.11■□□□□ 0.33
S1PR3Q99500 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.11■□□□□ 0.33
S1PR3Q99500 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.11■□□□□ 0.33
S1PR3Q99500 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms