Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.93■□□□□ 0.46
CMTM3Q96MX0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 AC012354.3-201ENST00000623734 483 ntBASIC17.92■□□□□ 0.46
CMTM3Q96MX0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CMTM3Q96MX0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 PCDHAC2-203ENST00000615316 3011 ntBASIC17.91■□□□□ 0.46
CMTM3Q96MX0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 AL020996.1-203ENST00000536896 2307 ntBASIC17.91■□□□□ 0.46
CMTM3Q96MX0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.91■□□□□ 0.46
CMTM3Q96MX0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMTM3Q96MX0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
CMTM3Q96MX0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CMTM3Q96MX0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.89■□□□□ 0.45
CMTM3Q96MX0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CMTM3Q96MX0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CMTM3Q96MX0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CMTM3Q96MX0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CMTM3Q96MX0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CMTM3Q96MX0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.88■□□□□ 0.45
CMTM3Q96MX0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.88■□□□□ 0.45
CMTM3Q96MX0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CMTM3Q96MX0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.88■□□□□ 0.45
CMTM3Q96MX0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CMTM3Q96MX0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CMTM3Q96MX0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CMTM3Q96MX0 FP700111.2-201ENST00000619190 1892 ntBASIC17.88■□□□□ 0.45
CMTM3Q96MX0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CMTM3Q96MX0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CMTM3Q96MX0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CMTM3Q96MX0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.87■□□□□ 0.45
CMTM3Q96MX0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.87■□□□□ 0.45
CMTM3Q96MX0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CMTM3Q96MX0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CMTM3Q96MX0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CMTM3Q96MX0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CMTM3Q96MX0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.87■□□□□ 0.45
CMTM3Q96MX0 AC112907.3-201ENST00000577781 2400 ntBASIC17.87■□□□□ 0.45
CMTM3Q96MX0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.87■□□□□ 0.45
CMTM3Q96MX0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.87■□□□□ 0.45
CMTM3Q96MX0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.87■□□□□ 0.45
CMTM3Q96MX0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.87■□□□□ 0.45
CMTM3Q96MX0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.87■□□□□ 0.45
CMTM3Q96MX0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms