Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.66■■□□□ 1.54
STAG1Q8WVM7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 AC026310.3-201ENST00000625186 2373 ntBASIC24.65■■□□□ 1.54
STAG1Q8WVM7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.65■■□□□ 1.54
STAG1Q8WVM7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
STAG1Q8WVM7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
STAG1Q8WVM7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
STAG1Q8WVM7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
STAG1Q8WVM7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
STAG1Q8WVM7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
STAG1Q8WVM7 AC091799.1-201ENST00000422823 811 ntBASIC24.64■■□□□ 1.54
STAG1Q8WVM7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.64■■□□□ 1.54
STAG1Q8WVM7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.64■■□□□ 1.54
STAG1Q8WVM7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.64■■□□□ 1.54
STAG1Q8WVM7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.64■■□□□ 1.54
STAG1Q8WVM7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
STAG1Q8WVM7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
STAG1Q8WVM7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.64■■□□□ 1.53
STAG1Q8WVM7 FEM1AP4-201ENST00000443167 1987 ntBASIC24.63■■□□□ 1.53
STAG1Q8WVM7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
STAG1Q8WVM7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 MIR663A-201ENST00000385250 93 ntBASIC24.62■■□□□ 1.53
STAG1Q8WVM7 AC007322.1-201ENST00000426983 750 ntBASIC24.62■■□□□ 1.53
STAG1Q8WVM7 NCF1B-203ENST00000435988 1254 ntBASIC24.62■■□□□ 1.53
STAG1Q8WVM7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
STAG1Q8WVM7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
STAG1Q8WVM7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
STAG1Q8WVM7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
STAG1Q8WVM7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.61■■□□□ 1.53
STAG1Q8WVM7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
STAG1Q8WVM7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
STAG1Q8WVM7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
STAG1Q8WVM7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
STAG1Q8WVM7 AC068338.2-201ENST00000563278 1430 ntBASIC24.61■■□□□ 1.53
STAG1Q8WVM7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
STAG1Q8WVM7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.6■■□□□ 1.53
STAG1Q8WVM7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.6■■□□□ 1.53
STAG1Q8WVM7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
STAG1Q8WVM7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
STAG1Q8WVM7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.6■■□□□ 1.53
STAG1Q8WVM7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
STAG1Q8WVM7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
STAG1Q8WVM7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.6■■□□□ 1.53
STAG1Q8WVM7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
STAG1Q8WVM7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
STAG1Q8WVM7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
STAG1Q8WVM7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
STAG1Q8WVM7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
STAG1Q8WVM7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
STAG1Q8WVM7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
STAG1Q8WVM7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms