Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.72■■□□□ 1.23
LNX1Q8TBB1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.72■■□□□ 1.23
LNX1Q8TBB1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.72■■□□□ 1.23
LNX1Q8TBB1 AC083906.2-201ENST00000511578 360 ntBASIC22.72■■□□□ 1.23
LNX1Q8TBB1 AL121832.2-201ENST00000610979 668 ntBASIC22.72■■□□□ 1.23
LNX1Q8TBB1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.72■■□□□ 1.23
LNX1Q8TBB1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
LNX1Q8TBB1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LNX1Q8TBB1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.72■■□□□ 1.23
LNX1Q8TBB1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
LNX1Q8TBB1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 CNN2P6-201ENST00000439038 900 ntBASIC22.71■■□□□ 1.23
LNX1Q8TBB1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
LNX1Q8TBB1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
LNX1Q8TBB1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.23
LNX1Q8TBB1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.7■■□□□ 1.23
LNX1Q8TBB1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.7■■□□□ 1.23
LNX1Q8TBB1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 AC053503.5-201ENST00000601508 636 ntBASIC22.7■■□□□ 1.22
LNX1Q8TBB1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
LNX1Q8TBB1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 TSPY6P-201ENST00000448518 926 ntBASIC22.69■■□□□ 1.22
LNX1Q8TBB1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 AC010536.3-201ENST00000620306 533 ntBASIC22.69■■□□□ 1.22
LNX1Q8TBB1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.69■■□□□ 1.22
LNX1Q8TBB1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 GUSBP6-202ENST00000438529 1198 ntBASIC22.68■■□□□ 1.22
LNX1Q8TBB1 SLC7A5P2-201ENST00000553010 536 ntBASIC22.68■■□□□ 1.22
LNX1Q8TBB1 AC142086.2-201ENST00000569753 217 ntBASIC22.68■■□□□ 1.22
LNX1Q8TBB1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LNX1Q8TBB1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LNX1Q8TBB1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms