Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTTNQ86VV8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RTTNQ86VV8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
RTTNQ86VV8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RTTNQ86VV8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.34■□□□□ 0.53
RTTNQ86VV8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.34■□□□□ 0.53
RTTNQ86VV8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTTNQ86VV8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTTNQ86VV8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTTNQ86VV8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTTNQ86VV8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTTNQ86VV8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTTNQ86VV8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTTNQ86VV8 KRT19P1-201ENST00000405746 1186 ntBASIC18.34■□□□□ 0.53
RTTNQ86VV8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.34■□□□□ 0.53
RTTNQ86VV8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.34■□□□□ 0.53
RTTNQ86VV8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.34■□□□□ 0.53
RTTNQ86VV8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.34■□□□□ 0.53
RTTNQ86VV8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.34■□□□□ 0.53
RTTNQ86VV8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.33■□□□□ 0.53
RTTNQ86VV8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.33■□□□□ 0.53
RTTNQ86VV8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTTNQ86VV8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTTNQ86VV8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RTTNQ86VV8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.33■□□□□ 0.53
RTTNQ86VV8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTTNQ86VV8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.33■□□□□ 0.53
RTTNQ86VV8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.33■□□□□ 0.53
RTTNQ86VV8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RTTNQ86VV8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTTNQ86VV8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTTNQ86VV8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
RTTNQ86VV8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RTTNQ86VV8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.33■□□□□ 0.52
RTTNQ86VV8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTTNQ86VV8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.33■□□□□ 0.52
RTTNQ86VV8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RTTNQ86VV8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTTNQ86VV8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTTNQ86VV8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTTNQ86VV8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.33■□□□□ 0.52
RTTNQ86VV8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTTNQ86VV8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.33■□□□□ 0.52
RTTNQ86VV8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.33■□□□□ 0.52
RTTNQ86VV8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.33■□□□□ 0.52
RTTNQ86VV8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.33■□□□□ 0.52
RTTNQ86VV8 CD99P1-205ENST00000527459 561 ntBASIC18.33■□□□□ 0.52
RTTNQ86VV8 AC138907.5-202ENST00000569484 235 ntBASIC18.33■□□□□ 0.52
RTTNQ86VV8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTTNQ86VV8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTTNQ86VV8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTTNQ86VV8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RTTNQ86VV8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTTNQ86VV8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTTNQ86VV8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTTNQ86VV8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTTNQ86VV8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTTNQ86VV8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.32■□□□□ 0.52
RTTNQ86VV8 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.32■□□□□ 0.52
RTTNQ86VV8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.32■□□□□ 0.52
RTTNQ86VV8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTTNQ86VV8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTTNQ86VV8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTTNQ86VV8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTTNQ86VV8 PCDHAC2-203ENST00000615316 3011 ntBASIC18.32■□□□□ 0.52
RTTNQ86VV8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTTNQ86VV8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.32■□□□□ 0.52
RTTNQ86VV8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RTTNQ86VV8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTTNQ86VV8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTTNQ86VV8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTTNQ86VV8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.31■□□□□ 0.52
RTTNQ86VV8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.31■□□□□ 0.52
RTTNQ86VV8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
RTTNQ86VV8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTTNQ86VV8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTTNQ86VV8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTTNQ86VV8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
RTTNQ86VV8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTTNQ86VV8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTTNQ86VV8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.31■□□□□ 0.52
RTTNQ86VV8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTTNQ86VV8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RTTNQ86VV8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTTNQ86VV8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTTNQ86VV8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTTNQ86VV8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTTNQ86VV8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RTTNQ86VV8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTTNQ86VV8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTTNQ86VV8 AC137761.2-201ENST00000561729 223 ntBASIC18.3■□□□□ 0.52
RTTNQ86VV8 AC145350.3-201ENST00000569033 163 ntBASIC18.3■□□□□ 0.52
RTTNQ86VV8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.3■□□□□ 0.52
RTTNQ86VV8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTTNQ86VV8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTTNQ86VV8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTTNQ86VV8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTTNQ86VV8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTTNQ86VV8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTTNQ86VV8 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms