Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 MIR939-201ENST00000401314 82 ntBASIC19.42■□□□□ 0.7
REEP3Q6NUK4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
REEP3Q6NUK4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.41■□□□□ 0.7
REEP3Q6NUK4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 AC091305.1-201ENST00000479476 895 ntBASIC19.41■□□□□ 0.7
REEP3Q6NUK4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 AF213884.3-201ENST00000563833 479 ntBASIC19.41■□□□□ 0.7
REEP3Q6NUK4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.41■□□□□ 0.7
REEP3Q6NUK4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
REEP3Q6NUK4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
REEP3Q6NUK4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
REEP3Q6NUK4 AP005212.1-201ENST00000581547 1997 ntBASIC19.39■□□□□ 0.7
REEP3Q6NUK4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 AC053503.5-201ENST00000601508 636 ntBASIC19.39■□□□□ 0.69
REEP3Q6NUK4 AC110285.6-201ENST00000617652 491 ntBASIC19.39■□□□□ 0.69
REEP3Q6NUK4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.39■□□□□ 0.69
REEP3Q6NUK4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.38■□□□□ 0.69
REEP3Q6NUK4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
REEP3Q6NUK4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
REEP3Q6NUK4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.38■□□□□ 0.69
REEP3Q6NUK4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.38■□□□□ 0.69
REEP3Q6NUK4 AC092667.1-201ENST00000434301 2586 ntBASIC19.38■□□□□ 0.69
REEP3Q6NUK4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
REEP3Q6NUK4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
REEP3Q6NUK4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.38■□□□□ 0.69
REEP3Q6NUK4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.38■□□□□ 0.69
REEP3Q6NUK4 AC012414.1-201ENST00000556676 535 ntBASIC19.38■□□□□ 0.69
REEP3Q6NUK4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
REEP3Q6NUK4 EEF1DP3-203ENST00000566025 782 ntBASIC19.38■□□□□ 0.69
REEP3Q6NUK4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.38■□□□□ 0.69
REEP3Q6NUK4 AL136967.2-201ENST00000623968 743 ntBASIC19.38■□□□□ 0.69
REEP3Q6NUK4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
REEP3Q6NUK4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
REEP3Q6NUK4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
REEP3Q6NUK4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
REEP3Q6NUK4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
REEP3Q6NUK4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
REEP3Q6NUK4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
REEP3Q6NUK4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
REEP3Q6NUK4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
REEP3Q6NUK4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms