Protein–RNA interactions for Protein: Q15078

CDK5R1, Cyclin-dependent kinase 5 activator 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1Q15078 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5R1Q15078 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5R1Q15078 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.33■□□□□ 0.52
CDK5R1Q15078 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5R1Q15078 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5R1Q15078 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5R1Q15078 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5R1Q15078 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5R1Q15078 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.33■□□□□ 0.52
CDK5R1Q15078 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CDK5R1Q15078 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5R1Q15078 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5R1Q15078 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5R1Q15078 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5R1Q15078 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.32■□□□□ 0.52
CDK5R1Q15078 AFG3L1P-217ENST00000557444 2447 ntBASIC18.32■□□□□ 0.52
CDK5R1Q15078 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5R1Q15078 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDK5R1Q15078 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.32■□□□□ 0.52
CDK5R1Q15078 PCDHAC2-203ENST00000615316 3011 ntBASIC18.32■□□□□ 0.52
CDK5R1Q15078 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5R1Q15078 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5R1Q15078 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CDK5R1Q15078 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5R1Q15078 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5R1Q15078 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5R1Q15078 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDK5R1Q15078 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.32■□□□□ 0.52
CDK5R1Q15078 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK5R1Q15078 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK5R1Q15078 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDK5R1Q15078 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5R1Q15078 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5R1Q15078 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDK5R1Q15078 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDK5R1Q15078 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5R1Q15078 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5R1Q15078 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
CDK5R1Q15078 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CDK5R1Q15078 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5R1Q15078 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5R1Q15078 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5R1Q15078 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5R1Q15078 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5R1Q15078 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5R1Q15078 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5R1Q15078 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.31■□□□□ 0.52
CDK5R1Q15078 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.31■□□□□ 0.52
CDK5R1Q15078 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.31■□□□□ 0.52
CDK5R1Q15078 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5R1Q15078 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.31■□□□□ 0.52
CDK5R1Q15078 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.31■□□□□ 0.52
CDK5R1Q15078 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5R1Q15078 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.31■□□□□ 0.52
CDK5R1Q15078 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5R1Q15078 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDK5R1Q15078 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5R1Q15078 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5R1Q15078 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5R1Q15078 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDK5R1Q15078 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5R1Q15078 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5R1Q15078 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5R1Q15078 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK5R1Q15078 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.3■□□□□ 0.52
CDK5R1Q15078 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5R1Q15078 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5R1Q15078 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5R1Q15078 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5R1Q15078 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.3■□□□□ 0.52
CDK5R1Q15078 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5R1Q15078 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5R1Q15078 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDK5R1Q15078 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDK5R1Q15078 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5R1Q15078 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK5R1Q15078 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK5R1Q15078 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5R1Q15078 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDK5R1Q15078 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5R1Q15078 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDK5R1Q15078 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5R1Q15078 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK5R1Q15078 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK5R1Q15078 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5R1Q15078 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.29■□□□□ 0.52
CDK5R1Q15078 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDK5R1Q15078 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.29■□□□□ 0.52
CDK5R1Q15078 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.29■□□□□ 0.52
CDK5R1Q15078 MIR4466-201ENST00000606121 54 ntBASIC18.29■□□□□ 0.52
CDK5R1Q15078 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDK5R1Q15078 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDK5R1Q15078 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK5R1Q15078 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.29■□□□□ 0.52
CDK5R1Q15078 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5R1Q15078 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK5R1Q15078 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5R1Q15078 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5R1Q15078 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK5R1Q15078 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms