Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PBX2P1-201ENST00000493219 1291 ntBASIC15.87■□□□□ 0.13
HIST1H1AQ02539 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H1AQ02539 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 AC003102.1-202ENST00000563394 1796 ntBASIC15.86■□□□□ 0.13
HIST1H1AQ02539 AP006587.3-201ENST00000525742 1516 ntBASIC15.86■□□□□ 0.13
HIST1H1AQ02539 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.86■□□□□ 0.13
HIST1H1AQ02539 IGHV3-19-201ENST00000521488 291 ntBASIC15.86■□□□□ 0.13
HIST1H1AQ02539 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 SMUG1P1-201ENST00000590640 811 ntBASIC15.86■□□□□ 0.13
HIST1H1AQ02539 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1AQ02539 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.85■□□□□ 0.13
HIST1H1AQ02539 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1AQ02539 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 AC099791.1-201ENST00000416440 715 ntBASIC15.84■□□□□ 0.13
HIST1H1AQ02539 AC027682.1-201ENST00000562846 899 ntBASIC15.84■□□□□ 0.13
HIST1H1AQ02539 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1AQ02539 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
HIST1H1AQ02539 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.83■□□□□ 0.13
HIST1H1AQ02539 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H1AQ02539 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H1AQ02539 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H1AQ02539 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1AQ02539 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.83■□□□□ 0.12
HIST1H1AQ02539 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.83■□□□□ 0.12
HIST1H1AQ02539 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1AQ02539 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
HIST1H1AQ02539 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.83■□□□□ 0.12
HIST1H1AQ02539 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.83■□□□□ 0.12
HIST1H1AQ02539 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1AQ02539 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1AQ02539 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1AQ02539 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1AQ02539 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1AQ02539 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms