Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP6V0CP27449 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP6V0CP27449 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP6V0CP27449 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP6V0CP27449 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP6V0CP27449 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP6V0CP27449 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ATP6V0CP27449 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 AC099778.1-201ENST00000568593 1911 ntBASIC16.66■□□□□ 0.26
ATP6V0CP27449 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ATP6V0CP27449 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.66■□□□□ 0.26
ATP6V0CP27449 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.66■□□□□ 0.26
ATP6V0CP27449 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ATP6V0CP27449 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP6V0CP27449 AC121338.2-201ENST00000622535 1744 ntBASIC16.66■□□□□ 0.26
ATP6V0CP27449 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ATP6V0CP27449 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ATP6V0CP27449 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP6V0CP27449 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP6V0CP27449 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ATP6V0CP27449 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.65■□□□□ 0.26
ATP6V0CP27449 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ATP6V0CP27449 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0CP27449 AC116562.4-201ENST00000641316 2276 ntBASIC16.65■□□□□ 0.26
ATP6V0CP27449 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ATP6V0CP27449 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0CP27449 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ATP6V0CP27449 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
ATP6V0CP27449 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0CP27449 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0CP27449 AC074183.2-201ENST00000623112 922 ntBASIC16.64■□□□□ 0.25
ATP6V0CP27449 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0CP27449 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0CP27449 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
ATP6V0CP27449 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0CP27449 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP6V0CP27449 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0CP27449 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0CP27449 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0CP27449 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP6V0CP27449 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0CP27449 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP6V0CP27449 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP6V0CP27449 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0CP27449 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ATP6V0CP27449 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ATP6V0CP27449 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0CP27449 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP6V0CP27449 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0CP27449 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0CP27449 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms