Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.33■■□□□ 1.32
TPM3P06753 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TPM3P06753 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.33■■□□□ 1.32
TPM3P06753 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TPM3P06753 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TPM3P06753 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
TPM3P06753 AC138932.1-201ENST00000534164 6830 ntBASIC23.32■■□□□ 1.32
TPM3P06753 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TPM3P06753 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
TPM3P06753 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
TPM3P06753 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TPM3P06753 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TPM3P06753 AC099791.2-201ENST00000605725 427 ntBASIC23.32■■□□□ 1.32
TPM3P06753 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TPM3P06753 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.32■■□□□ 1.32
TPM3P06753 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.32■■□□□ 1.32
TPM3P06753 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.32■■□□□ 1.32
TPM3P06753 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
TPM3P06753 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
TPM3P06753 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TPM3P06753 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TPM3P06753 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TPM3P06753 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.31■■□□□ 1.32
TPM3P06753 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TPM3P06753 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TPM3P06753 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.31■■□□□ 1.32
TPM3P06753 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TPM3P06753 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
TPM3P06753 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
TPM3P06753 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TPM3P06753 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.31■■□□□ 1.32
TPM3P06753 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.31■■□□□ 1.32
TPM3P06753 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
TPM3P06753 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
TPM3P06753 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TPM3P06753 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TPM3P06753 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TPM3P06753 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TPM3P06753 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TPM3P06753 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TPM3P06753 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.3■■□□□ 1.32
TPM3P06753 AC092171.4-201ENST00000609130 632 ntBASIC23.3■■□□□ 1.32
TPM3P06753 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TPM3P06753 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
TPM3P06753 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TPM3P06753 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.3■■□□□ 1.32
TPM3P06753 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TPM3P06753 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TPM3P06753 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.29■■□□□ 1.32
TPM3P06753 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TPM3P06753 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TPM3P06753 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TPM3P06753 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TPM3P06753 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.29■■□□□ 1.32
TPM3P06753 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.29■■□□□ 1.32
TPM3P06753 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TPM3P06753 MIR3181-201ENST00000578512 73 ntBASIC23.29■■□□□ 1.32
TPM3P06753 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TPM3P06753 AC003102.1-202ENST00000563394 1796 ntBASIC23.29■■□□□ 1.32
TPM3P06753 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TPM3P06753 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
TPM3P06753 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TPM3P06753 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TPM3P06753 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.28■■□□□ 1.32
TPM3P06753 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TPM3P06753 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TPM3P06753 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TPM3P06753 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TPM3P06753 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TPM3P06753 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.28■■□□□ 1.32
TPM3P06753 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
TPM3P06753 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TPM3P06753 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM3P06753 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM3P06753 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TPM3P06753 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
TPM3P06753 AC009299.2-201ENST00000482477 511 ntBASIC23.27■■□□□ 1.32
TPM3P06753 AP004607.7-201ENST00000527152 1677 ntBASIC23.27■■□□□ 1.32
TPM3P06753 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.27■■□□□ 1.32
TPM3P06753 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.27■■□□□ 1.32
TPM3P06753 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.27■■□□□ 1.32
TPM3P06753 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TPM3P06753 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM3P06753 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM3P06753 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
TPM3P06753 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.27■■□□□ 1.31
TPM3P06753 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.27■■□□□ 1.31
TPM3P06753 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TPM3P06753 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TPM3P06753 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
TPM3P06753 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TPM3P06753 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
TPM3P06753 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TPM3P06753 UNC93B8-201ENST00000511903 705 ntBASIC23.26■■□□□ 1.31
TPM3P06753 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.26■■□□□ 1.31
TPM3P06753 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TPM3P06753 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TPM3P06753 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
TPM3P06753 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TPM3P06753 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms