Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.28■■□□□ 1
USP12O75317 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP12O75317 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP12O75317 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
USP12O75317 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP12O75317 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
USP12O75317 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
USP12O75317 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
USP12O75317 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP12O75317 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
USP12O75317 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP12O75317 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.27■■□□□ 1
USP12O75317 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP12O75317 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP12O75317 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.27■■□□□ 1
USP12O75317 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.27■■□□□ 1
USP12O75317 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
USP12O75317 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP12O75317 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
USP12O75317 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP12O75317 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
USP12O75317 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
USP12O75317 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP12O75317 AC079140.4-201ENST00000507448 529 ntBASIC21.26■□□□□ 0.99
USP12O75317 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.26■□□□□ 0.99
USP12O75317 EEF1DP3-203ENST00000566025 782 ntBASIC21.26■□□□□ 0.99
USP12O75317 AC080038.1-201ENST00000611274 1154 ntBASIC21.26■□□□□ 0.99
USP12O75317 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP12O75317 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.26■□□□□ 0.99
USP12O75317 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.26■□□□□ 0.99
USP12O75317 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP12O75317 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
USP12O75317 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.26■□□□□ 0.99
USP12O75317 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.26■□□□□ 0.99
USP12O75317 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP12O75317 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP12O75317 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP12O75317 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP12O75317 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.26■□□□□ 0.99
USP12O75317 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
USP12O75317 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP12O75317 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP12O75317 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
USP12O75317 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.25■□□□□ 0.99
USP12O75317 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.25■□□□□ 0.99
USP12O75317 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP12O75317 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
USP12O75317 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP12O75317 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP12O75317 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP12O75317 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP12O75317 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP12O75317 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.25■□□□□ 0.99
USP12O75317 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP12O75317 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP12O75317 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
USP12O75317 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
USP12O75317 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
USP12O75317 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
USP12O75317 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
USP12O75317 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP12O75317 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
USP12O75317 AC016769.1-201ENST00000409132 1010 ntBASIC21.24■□□□□ 0.99
USP12O75317 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP12O75317 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP12O75317 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.24■□□□□ 0.99
USP12O75317 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.24■□□□□ 0.99
USP12O75317 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.24■□□□□ 0.99
USP12O75317 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP12O75317 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP12O75317 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP12O75317 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP12O75317 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP12O75317 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP12O75317 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP12O75317 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP12O75317 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
USP12O75317 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
USP12O75317 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP12O75317 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.23■□□□□ 0.99
USP12O75317 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP12O75317 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.23■□□□□ 0.99
USP12O75317 AC053503.5-201ENST00000601508 636 ntBASIC21.23■□□□□ 0.99
USP12O75317 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP12O75317 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP12O75317 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP12O75317 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP12O75317 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
USP12O75317 AC061975.6-201ENST00000579045 1553 ntBASIC21.23■□□□□ 0.99
USP12O75317 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
USP12O75317 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP12O75317 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.22■□□□□ 0.99
USP12O75317 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP12O75317 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.22■□□□□ 0.99
USP12O75317 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
USP12O75317 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.22■□□□□ 0.99
USP12O75317 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
USP12O75317 AC137761.2-201ENST00000561729 223 ntBASIC21.22■□□□□ 0.99
USP12O75317 AC145350.3-201ENST00000569033 163 ntBASIC21.22■□□□□ 0.99
USP12O75317 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms