Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-7A0A0C4DH55 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
IGKV3D-7A0A0C4DH55 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 DUX4L13-201ENST00000554103 1267 ntBASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 DUX4L15-201ENST00000611059 1267 ntBASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 DUX4L23-201ENST00000615195 1269 ntBASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 DUX4L24-201ENST00000617576 1269 ntBASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 DUX4L22-201ENST00000618238 1269 ntBASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 DUX4L20-201ENST00000619712 1269 ntBASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 DUX4L21-201ENST00000622058 1269 ntBASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 DUX4L10-201ENST00000622460 1267 ntBASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 DUX4L25-201ENST00000624915 1269 ntBASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 AC116562.4-201ENST00000641316 2276 ntBASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IGKV3D-7A0A0C4DH55 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 AC007613.1-201ENST00000572811 2597 ntBASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGKV3D-7A0A0C4DH55 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGKV3D-7A0A0C4DH55 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms