Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 MIR572-201ENST00000384983 95 ntBASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 AC073314.1-201ENST00000568729 2216 ntBASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 AC121338.2-201ENST00000622535 1744 ntBASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV3A0A0B4J244 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV3A0A0B4J244 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV3A0A0B4J244 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV3A0A0B4J244 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV3A0A0B4J244 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRAV3A0A0B4J244 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV3A0A0B4J244 MIR939-201ENST00000401314 82 ntBASIC16.77■□□□□ 0.28
TRAV3A0A0B4J244 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV3A0A0B4J244 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV3A0A0B4J244 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.77■□□□□ 0.28
TRAV3A0A0B4J244 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV3A0A0B4J244 AL355001.2-201ENST00000620617 1191 ntBASIC16.77■□□□□ 0.28
TRAV3A0A0B4J244 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 RASA4CP-201ENST00000424092 1398 ntBASIC16.77■□□□□ 0.27
TRAV3A0A0B4J244 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 AL031432.3-201ENST00000607698 485 ntBASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV3A0A0B4J244 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 AL136967.2-201ENST00000623968 743 ntBASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 AP005212.1-201ENST00000581547 1997 ntBASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV3A0A0B4J244 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV3A0A0B4J244 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV3A0A0B4J244 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV3A0A0B4J244 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV3A0A0B4J244 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV3A0A0B4J244 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV3A0A0B4J244 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAV3A0A0B4J244 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRAV3A0A0B4J244 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV3A0A0B4J244 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV3A0A0B4J244 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV3A0A0B4J244 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV3A0A0B4J244 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV3A0A0B4J244 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV3A0A0B4J244 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV3A0A0B4J244 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms