Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV18A0A075B6X5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV18A0A075B6X5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.91■□□□□ 0.46
TRAV18A0A075B6X5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRAV18A0A075B6X5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV18A0A075B6X5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRAV18A0A075B6X5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV18A0A075B6X5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 AC099791.2-201ENST00000605725 427 ntBASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV18A0A075B6X5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
TRAV18A0A075B6X5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
TRAV18A0A075B6X5 AC121338.2-201ENST00000622535 1744 ntBASIC17.89■□□□□ 0.46
TRAV18A0A075B6X5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
TRAV18A0A075B6X5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 AC239859.2-201ENST00000444165 318 ntBASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 MIR3181-201ENST00000578512 73 ntBASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 AC020907.5-201ENST00000624372 1936 ntBASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV18A0A075B6X5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 AC010525.1-201ENST00000585559 441 ntBASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 MIR6724-1-201ENST00000616420 92 ntBASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 MIR6724-2-201ENST00000616483 92 ntBASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 MIR6724-4-201ENST00000617390 92 ntBASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 MIR6724-3-201ENST00000622482 92 ntBASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRAV18A0A075B6X5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 AC007225.1-201ENST00000566331 1836 ntBASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
TRAV18A0A075B6X5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms