Protein–RNA interactions for Protein: A0A075B6N3

TRBV24-1, T-cell receptor beta variable 24-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV24-1A0A075B6N3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV24-1A0A075B6N3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
TRBV24-1A0A075B6N3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV24-1A0A075B6N3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRBV24-1A0A075B6N3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV24-1A0A075B6N3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV24-1A0A075B6N3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 AC093503.3-201ENST00000624917 2352 ntBASIC15.89■□□□□ 0.13
TRBV24-1A0A075B6N3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 ABHD17AP4-201ENST00000411545 909 ntBASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV24-1A0A075B6N3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 AC007225.1-201ENST00000566331 1836 ntBASIC15.87■□□□□ 0.13
TRBV24-1A0A075B6N3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 AC018755.3-202ENST00000596210 929 ntBASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV24-1A0A075B6N3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms