Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 AC144652.1-201ENST00000609974 1624 ntBASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.67
LINC01558Q9Y6Z2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC10.9□□□□□ -0.67
LINC01558Q9Y6Z2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC10.9□□□□□ -0.67
LINC01558Q9Y6Z2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01558Q9Y6Z2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01558Q9Y6Z2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01558Q9Y6Z2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 AC011270.2-201ENST00000624293 2550 ntBASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 AC106820.2-201ENST00000563775 3264 ntBASIC10.89□□□□□ -0.67
LINC01558Q9Y6Z2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01558Q9Y6Z2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01558Q9Y6Z2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms