Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 AC104564.3-201ENST00000582367 638 ntBASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 AC087239.1-201ENST00000622671 572 ntBASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
C12orf4Q9NQ89 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 AC120498.9-201ENST00000339021 3867 ntBASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
C12orf4Q9NQ89 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 AC099791.2-201ENST00000605725 427 ntBASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C12orf4Q9NQ89 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
C12orf4Q9NQ89 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
C12orf4Q9NQ89 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
C12orf4Q9NQ89 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
C12orf4Q9NQ89 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
C12orf4Q9NQ89 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
C12orf4Q9NQ89 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.02■□□□□ 0.47
C12orf4Q9NQ89 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 FEM1AP4-201ENST00000443167 1987 ntBASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 OR2I1P-207ENST00000453522 948 ntBASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.01■□□□□ 0.47
C12orf4Q9NQ89 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18■□□□□ 0.47
C12orf4Q9NQ89 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
C12orf4Q9NQ89 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C12orf4Q9NQ89 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C12orf4Q9NQ89 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18■□□□□ 0.47
C12orf4Q9NQ89 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18■□□□□ 0.47
C12orf4Q9NQ89 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18■□□□□ 0.47
C12orf4Q9NQ89 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18■□□□□ 0.47
C12orf4Q9NQ89 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C12orf4Q9NQ89 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18■□□□□ 0.47
C12orf4Q9NQ89 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18■□□□□ 0.47
C12orf4Q9NQ89 AL356740.2-201ENST00000601559 647 ntBASIC18■□□□□ 0.47
C12orf4Q9NQ89 AL157384.1-201ENST00000445995 2473 ntBASIC18■□□□□ 0.47
C12orf4Q9NQ89 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
C12orf4Q9NQ89 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C12orf4Q9NQ89 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18■□□□□ 0.47
C12orf4Q9NQ89 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms