Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CGREF1Q99674 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CGREF1Q99674 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CGREF1Q99674 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CGREF1Q99674 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CGREF1Q99674 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CGREF1Q99674 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.83■□□□□ 0.76
CGREF1Q99674 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.83■□□□□ 0.76
CGREF1Q99674 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.82■□□□□ 0.76
CGREF1Q99674 AC121338.2-201ENST00000622535 1744 ntBASIC19.82■□□□□ 0.76
CGREF1Q99674 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
CGREF1Q99674 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CGREF1Q99674 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CGREF1Q99674 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CGREF1Q99674 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CGREF1Q99674 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.82■□□□□ 0.76
CGREF1Q99674 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.82■□□□□ 0.76
CGREF1Q99674 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CGREF1Q99674 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CGREF1Q99674 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CGREF1Q99674 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CGREF1Q99674 AC007952.6-201ENST00000573168 2673 ntBASIC19.82■□□□□ 0.76
CGREF1Q99674 AC003957.1-201ENST00000625108 2673 ntBASIC19.82■□□□□ 0.76
CGREF1Q99674 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.82■□□□□ 0.76
CGREF1Q99674 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CGREF1Q99674 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CGREF1Q99674 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.82■□□□□ 0.76
CGREF1Q99674 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CGREF1Q99674 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CGREF1Q99674 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.81■□□□□ 0.76
CGREF1Q99674 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CGREF1Q99674 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CGREF1Q99674 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CGREF1Q99674 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.81■□□□□ 0.76
CGREF1Q99674 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CGREF1Q99674 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CGREF1Q99674 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CGREF1Q99674 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CGREF1Q99674 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CGREF1Q99674 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
CGREF1Q99674 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CGREF1Q99674 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.81■□□□□ 0.76
CGREF1Q99674 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.81■□□□□ 0.76
CGREF1Q99674 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CGREF1Q99674 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.81■□□□□ 0.76
CGREF1Q99674 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.81■□□□□ 0.76
CGREF1Q99674 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.81■□□□□ 0.76
CGREF1Q99674 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CGREF1Q99674 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.81■□□□□ 0.76
CGREF1Q99674 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CGREF1Q99674 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CGREF1Q99674 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CGREF1Q99674 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CGREF1Q99674 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CGREF1Q99674 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CGREF1Q99674 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CGREF1Q99674 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CGREF1Q99674 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.8■□□□□ 0.76
CGREF1Q99674 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CGREF1Q99674 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CGREF1Q99674 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.8■□□□□ 0.76
CGREF1Q99674 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.8■□□□□ 0.76
CGREF1Q99674 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.8■□□□□ 0.76
CGREF1Q99674 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.8■□□□□ 0.76
CGREF1Q99674 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CGREF1Q99674 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CGREF1Q99674 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CGREF1Q99674 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CGREF1Q99674 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.8■□□□□ 0.76
CGREF1Q99674 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.79■□□□□ 0.76
CGREF1Q99674 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CGREF1Q99674 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CGREF1Q99674 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CGREF1Q99674 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.79■□□□□ 0.76
CGREF1Q99674 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CGREF1Q99674 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.79■□□□□ 0.76
CGREF1Q99674 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CGREF1Q99674 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.79■□□□□ 0.76
CGREF1Q99674 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.79■□□□□ 0.76
CGREF1Q99674 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.79■□□□□ 0.76
CGREF1Q99674 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.79■□□□□ 0.76
CGREF1Q99674 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CGREF1Q99674 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CGREF1Q99674 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.79■□□□□ 0.76
CGREF1Q99674 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CGREF1Q99674 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CGREF1Q99674 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CGREF1Q99674 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CGREF1Q99674 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.78■□□□□ 0.76
CGREF1Q99674 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CGREF1Q99674 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CGREF1Q99674 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.78■□□□□ 0.76
CGREF1Q99674 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.78■□□□□ 0.76
CGREF1Q99674 AC027702.1-201ENST00000563810 1770 ntBASIC19.78■□□□□ 0.76
CGREF1Q99674 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CGREF1Q99674 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CGREF1Q99674 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CGREF1Q99674 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.78■□□□□ 0.76
CGREF1Q99674 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CGREF1Q99674 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms