Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01561Q8N1V8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14□□□□□ -0.17
LINC01561Q8N1V8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01561Q8N1V8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14□□□□□ -0.17
LINC01561Q8N1V8 AC133561.4-201ENST00000566112 224 ntBASIC14□□□□□ -0.17
LINC01561Q8N1V8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14□□□□□ -0.17
LINC01561Q8N1V8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01561Q8N1V8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01561Q8N1V8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14□□□□□ -0.17
LINC01561Q8N1V8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01561Q8N1V8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14□□□□□ -0.17
LINC01561Q8N1V8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01561Q8N1V8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01561Q8N1V8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01561Q8N1V8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 BX842568.3-201ENST00000418104 571 ntBASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01561Q8N1V8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 AL035685.1-201ENST00000636663 812 ntBASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 AC007225.1-201ENST00000566331 1836 ntBASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01561Q8N1V8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01561Q8N1V8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms