Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
FOXR1Q6PIV2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
FOXR1Q6PIV2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.64■■□□□ 1.06
FOXR1Q6PIV2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
FOXR1Q6PIV2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
FOXR1Q6PIV2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 pRNA.6-201ENST00000610482 90 ntBASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 pRNA.5-201ENST00000612139 90 ntBASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 pRNA.11-201ENST00000618423 90 ntBASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 pRNA.13-201ENST00000619112 90 ntBASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXR1Q6PIV2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 AC144652.1-201ENST00000609974 1624 ntBASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
FOXR1Q6PIV2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
FOXR1Q6PIV2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXR1Q6PIV2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXR1Q6PIV2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FOXR1Q6PIV2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.62■■□□□ 1.05
FOXR1Q6PIV2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.62■■□□□ 1.05
FOXR1Q6PIV2 IKBKGP1-201ENST00000612193 1073 ntBASIC21.62■■□□□ 1.05
FOXR1Q6PIV2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
FOXR1Q6PIV2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXR1Q6PIV2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FOXR1Q6PIV2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
FOXR1Q6PIV2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 TSPY26P-201ENST00000476365 1326 ntBASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 AC034268.1-201ENST00000441047 882 ntBASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXR1Q6PIV2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
FOXR1Q6PIV2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms