Protein–RNA interactions for Protein: Q15078

CDK5R1, Cyclin-dependent kinase 5 activator 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1Q15078 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5R1Q15078 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK5R1Q15078 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5R1Q15078 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDK5R1Q15078 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK5R1Q15078 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5R1Q15078 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDK5R1Q15078 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CDK5R1Q15078 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
CDK5R1Q15078 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5R1Q15078 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5R1Q15078 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5R1Q15078 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK5R1Q15078 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5R1Q15078 AC007225.1-201ENST00000566331 1836 ntBASIC18.37■□□□□ 0.53
CDK5R1Q15078 AC020907.5-201ENST00000624372 1936 ntBASIC18.37■□□□□ 0.53
CDK5R1Q15078 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5R1Q15078 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5R1Q15078 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5R1Q15078 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK5R1Q15078 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5R1Q15078 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5R1Q15078 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5R1Q15078 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDK5R1Q15078 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5R1Q15078 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5R1Q15078 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5R1Q15078 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK5R1Q15078 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5R1Q15078 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CDK5R1Q15078 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5R1Q15078 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.36■□□□□ 0.53
CDK5R1Q15078 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.36■□□□□ 0.53
CDK5R1Q15078 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5R1Q15078 AC007952.6-201ENST00000573168 2673 ntBASIC18.36■□□□□ 0.53
CDK5R1Q15078 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDK5R1Q15078 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.36■□□□□ 0.53
CDK5R1Q15078 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
CDK5R1Q15078 AC011298.3-201ENST00000615796 283 ntBASIC18.36■□□□□ 0.53
CDK5R1Q15078 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5R1Q15078 AC003957.1-201ENST00000625108 2673 ntBASIC18.36■□□□□ 0.53
CDK5R1Q15078 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK5R1Q15078 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5R1Q15078 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5R1Q15078 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5R1Q15078 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.35■□□□□ 0.53
CDK5R1Q15078 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5R1Q15078 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5R1Q15078 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK5R1Q15078 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5R1Q15078 AL356441.2-201ENST00000443009 864 ntBASIC18.35■□□□□ 0.53
CDK5R1Q15078 DUX4L19-201ENST00000557448 1267 ntBASIC18.35■□□□□ 0.53
CDK5R1Q15078 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5R1Q15078 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.35■□□□□ 0.53
CDK5R1Q15078 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5R1Q15078 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5R1Q15078 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5R1Q15078 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK5R1Q15078 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5R1Q15078 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CDK5R1Q15078 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK5R1Q15078 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5R1Q15078 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK5R1Q15078 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5R1Q15078 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK5R1Q15078 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5R1Q15078 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5R1Q15078 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5R1Q15078 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5R1Q15078 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 SMUG1P1-201ENST00000590640 811 ntBASIC18.34■□□□□ 0.53
CDK5R1Q15078 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5R1Q15078 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDK5R1Q15078 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5R1Q15078 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5R1Q15078 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5R1Q15078 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5R1Q15078 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5R1Q15078 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5R1Q15078 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CDK5R1Q15078 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5R1Q15078 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5R1Q15078 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5R1Q15078 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5R1Q15078 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5R1Q15078 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.33■□□□□ 0.52
CDK5R1Q15078 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.33■□□□□ 0.52
CDK5R1Q15078 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms