Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRIM2P49643 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.81■□□□□ 0.76
PRIM2P49643 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRIM2P49643 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRIM2P49643 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRIM2P49643 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.81■□□□□ 0.76
PRIM2P49643 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.81■□□□□ 0.76
PRIM2P49643 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.81■□□□□ 0.76
PRIM2P49643 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRIM2P49643 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRIM2P49643 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PRIM2P49643 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRIM2P49643 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
PRIM2P49643 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
PRIM2P49643 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRIM2P49643 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.8■□□□□ 0.76
PRIM2P49643 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRIM2P49643 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.8■□□□□ 0.76
PRIM2P49643 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRIM2P49643 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.8■□□□□ 0.76
PRIM2P49643 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PRIM2P49643 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRIM2P49643 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRIM2P49643 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
PRIM2P49643 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.8■□□□□ 0.76
PRIM2P49643 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.8■□□□□ 0.76
PRIM2P49643 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.8■□□□□ 0.76
PRIM2P49643 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.8■□□□□ 0.76
PRIM2P49643 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRIM2P49643 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRIM2P49643 AL049796.1-201ENST00000565336 1766 ntBASIC19.8■□□□□ 0.76
PRIM2P49643 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRIM2P49643 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.79■□□□□ 0.76
PRIM2P49643 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.79■□□□□ 0.76
PRIM2P49643 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PRIM2P49643 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRIM2P49643 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRIM2P49643 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.79■□□□□ 0.76
PRIM2P49643 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.79■□□□□ 0.76
PRIM2P49643 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.79■□□□□ 0.76
PRIM2P49643 AL354811.1-201ENST00000610286 706 ntBASIC19.79■□□□□ 0.76
PRIM2P49643 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRIM2P49643 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRIM2P49643 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.79■□□□□ 0.76
PRIM2P49643 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.79■□□□□ 0.76
PRIM2P49643 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
PRIM2P49643 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.78■□□□□ 0.76
PRIM2P49643 AC005224.4-201ENST00000583262 1652 ntBASIC19.78■□□□□ 0.76
PRIM2P49643 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRIM2P49643 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRIM2P49643 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRIM2P49643 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRIM2P49643 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRIM2P49643 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRIM2P49643 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.78■□□□□ 0.76
PRIM2P49643 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.78■□□□□ 0.76
PRIM2P49643 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRIM2P49643 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.78■□□□□ 0.76
PRIM2P49643 AC012414.1-201ENST00000556676 535 ntBASIC19.78■□□□□ 0.76
PRIM2P49643 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRIM2P49643 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRIM2P49643 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRIM2P49643 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRIM2P49643 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.78■□□□□ 0.76
PRIM2P49643 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRIM2P49643 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.78■□□□□ 0.76
PRIM2P49643 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRIM2P49643 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRIM2P49643 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PRIM2P49643 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRIM2P49643 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.77■□□□□ 0.76
PRIM2P49643 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
PRIM2P49643 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRIM2P49643 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRIM2P49643 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRIM2P49643 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.77■□□□□ 0.76
PRIM2P49643 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRIM2P49643 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.77■□□□□ 0.76
PRIM2P49643 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
PRIM2P49643 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PRIM2P49643 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRIM2P49643 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRIM2P49643 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRIM2P49643 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRIM2P49643 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRIM2P49643 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRIM2P49643 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.76■□□□□ 0.75
PRIM2P49643 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.76■□□□□ 0.75
PRIM2P49643 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PRIM2P49643 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRIM2P49643 AC055733.4-201ENST00000638462 1354 ntBASIC19.76■□□□□ 0.75
PRIM2P49643 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRIM2P49643 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.76■□□□□ 0.75
PRIM2P49643 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.76■□□□□ 0.75
PRIM2P49643 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.76■□□□□ 0.75
PRIM2P49643 AL358852.1-201ENST00000623174 1268 ntBASIC19.76■□□□□ 0.75
PRIM2P49643 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRIM2P49643 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRIM2P49643 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PRIM2P49643 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms