Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.62e-6■■■■□ 23.6
MATR3P43243 TAMM41-209ENST00000486090 2768 ntTSL 29.87□□□□□ -0.832e-6■■■■□ 23.5
MATR3P43243 TAMM41-211ENST00000498127 746 ntTSL 29.63□□□□□ -0.872e-6■■■■□ 23.5
MATR3P43243 HMBOX1-215ENST00000560599 1426 ntTSL 520.59■□□□□ 0.896e-7■■■■□ 23.5
MATR3P43243 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.85■□□□□ 0.456e-7■■■■□ 23.5
MATR3P43243 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.45■□□□□ 0.226e-7■■■■□ 23.5
MATR3P43243 HMBOX1-213ENST00000560269 569 ntTSL 414.89□□□□□ -0.036e-7■■■■□ 23.5
MATR3P43243 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.056e-7■■■■□ 23.5
MATR3P43243 HMBOX1-207ENST00000519662 811 ntTSL 411.9□□□□□ -0.56e-7■■■■□ 23.5
MATR3P43243 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.686e-7■■■■□ 23.5
MATR3P43243 HMBOX1-208ENST00000521516 2216 ntTSL 28.01□□□□□ -1.136e-7■■■■□ 23.5
MATR3P43243 HMBOX1-214ENST00000560357 979 ntTSL 27.88□□□□□ -1.156e-7■■■■□ 23.5
MATR3P43243 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.99□□□□□ -1.296e-7■■■■□ 23.5
MATR3P43243 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.32□□□□□ -1.566e-7■■■■□ 23.5
MATR3P43243 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.691e-6■■■■□ 23.5
MATR3P43243 SMOC1-202ENST00000381280 3666 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.221e-6■■■■□ 23.5
MATR3P43243 CNOT2-227ENST00000551043 2288 ntTSL 220.95■□□□□ 0.952e-6■■■■□ 23.5
MATR3P43243 CNOT2-209ENST00000548159 2549 ntTSL 1 (best)17.79■□□□□ 0.442e-6■■■■□ 23.5
MATR3P43243 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.322e-6■■■■□ 23.5
MATR3P43243 CNOT2-223ENST00000550160 993 ntTSL 512.72□□□□□ -0.372e-6■■■■□ 23.5
MATR3P43243 CNOT2-201ENST00000229195 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.542e-6■■■■□ 23.5
MATR3P43243 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.37□□□□□ -1.079e-7■■■■□ 23.5
MATR3P43243 CCAR1-207ENST00000536012 2447 ntTSL 1 (best)7.93□□□□□ -1.149e-7■■■■□ 23.5
MATR3P43243 CCAR1-214ENST00000543225 2407 ntTSL 1 (best)7.49□□□□□ -1.219e-7■■■■□ 23.5
MATR3P43243 CCAR1-210ENST00000539250 701 ntTSL 27.1□□□□□ -1.279e-7■■■■□ 23.5
MATR3P43243 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.299e-7■■■■□ 23.5
MATR3P43243 CCAR1-213ENST00000541012 2432 ntTSL 1 (best)6.84□□□□□ -1.319e-7■■■■□ 23.5
MATR3P43243 CCAR1-215ENST00000543229 2475 ntTSL 26.8□□□□□ -1.329e-7■■■■□ 23.5
MATR3P43243 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.64□□□□□ -1.359e-7■■■■□ 23.5
MATR3P43243 CCAR1-216ENST00000543706 869 ntTSL 54.93□□□□□ -1.629e-7■■■■□ 23.5
MATR3P43243 CCAR1-211ENST00000539539 3224 ntTSL 24.53□□□□□ -1.689e-7■■■■□ 23.5
MATR3P43243 CCAR1-212ENST00000540210 3415 ntTSL 1 (best)4.16□□□□□ -1.749e-7■■■■□ 23.5
MATR3P43243 CCAR1-203ENST00000479143 478 ntTSL 54.05□□□□□ -1.769e-7■■■■□ 23.5
MATR3P43243 GMDS-AS1-213ENST00000534441 738 ntTSL 3 BASIC10.9□□□□□ -0.663e-8■■■■□ 23.5
MATR3P43243 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.49■■□□□ 1.351e-6■■■■□ 23.5
MATR3P43243 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.44■□□□□ 0.71e-6■■■■□ 23.5
MATR3P43243 DCAF8-207ENST00000447377 728 ntTSL 219.43■□□□□ 0.71e-6■■■■□ 23.5
MATR3P43243 DCAF8-208ENST00000461888 2277 ntTSL 518.98■□□□□ 0.631e-6■■■■□ 23.5
MATR3P43243 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.26■□□□□ 0.195e-9■■■■□ 23.5
MATR3P43243 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.11e-6■■■■□ 23.5
MATR3P43243 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.241e-6■■■■□ 23.5
MATR3P43243 DCAF8-205ENST00000419626 439 ntTSL 212.84□□□□□ -0.351e-6■■■■□ 23.5
MATR3P43243 DCAF8-202ENST00000368073 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.411e-6■■■■□ 23.5
MATR3P43243 DCAF8-204ENST00000407642 517 ntTSL 211.6□□□□□ -0.551e-6■■■■□ 23.5
MATR3P43243 DCAF8-216ENST00000495887 919 ntTSL 311.18□□□□□ -0.621e-6■■■■□ 23.5
MATR3P43243 AL139011.2-202ENST00000485079 914 ntTSL 310.28□□□□□ -0.761e-6■■■■□ 23.5
MATR3P43243 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.881e-6■■■■□ 23.5
MATR3P43243 DCAF8-206ENST00000440682 501 ntTSL 38.08□□□□□ -1.121e-6■■■■□ 23.5
MATR3P43243 PTK2-209ENST00000518509 569 ntTSL 47.85□□□□□ -1.154e-7■■■■□ 23.5
MATR3P43243 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.674e-7■■■■□ 23.5
MATR3P43243 KANK1-210ENST00000619269 5688 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.531e-6■■■■□ 23.5
MATR3P43243 KANK1-209ENST00000489369 7193 ntTSL 511.68□□□□□ -0.541e-6■■■■□ 23.5
MATR3P43243 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61e-6■■■■□ 23.5
MATR3P43243 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.731e-6■■■■□ 23.5
MATR3P43243 KANK1-201ENST00000354485 6912 ntTSL 29.87□□□□□ -0.831e-6■■■■□ 23.5
MATR3P43243 LRMDA-214ENST00000598708 433 ntTSL 38.52□□□□□ -1.053e-6■■■■□ 23.5
MATR3P43243 LRMDA-204ENST00000488655 307 ntTSL 28.12□□□□□ -1.113e-6■■■■□ 23.5
MATR3P43243 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.88□□□□□ -1.153e-6■■■■□ 23.5
MATR3P43243 CPED1-209ENST00000520801 553 ntTSL 412.4□□□□□ -0.421e-6■■■■□ 23.5
MATR3P43243 CPED1-204ENST00000428526 2219 ntTSL 28.3□□□□□ -1.081e-6■■■■□ 23.5
MATR3P43243 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.332e-6■■■■□ 23.4
MATR3P43243 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.482e-6■■■■□ 23.4
MATR3P43243 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.4■■□□□ 1.663e-8■■■■□ 23.4
MATR3P43243 KLHL26-203ENST00000595423 554 ntTSL 225.09■■□□□ 1.613e-8■■■■□ 23.4
MATR3P43243 KLHL26-206ENST00000600657 577 ntTSL 421.4■■□□□ 1.023e-8■■■■□ 23.4
MATR3P43243 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21■□□□□ 0.953e-8■■■■□ 23.4
MATR3P43243 KLHL26-204ENST00000596843 541 ntTSL 417.67■□□□□ 0.423e-8■■■■□ 23.4
MATR3P43243 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.343e-8■■■■□ 23.4
MATR3P43243 TBC1D8-204ENST00000463469 561 ntTSL 416.96■□□□□ 0.315e-6■■■■□ 23.4
MATR3P43243 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.382e-7■■■■□ 23.4
MATR3P43243 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.192e-7■■■■□ 23.4
MATR3P43243 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.132e-7■■■■□ 23.4
MATR3P43243 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.022e-7■■■■□ 23.4
MATR3P43243 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.192e-7■■■■□ 23.4
MATR3P43243 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.262e-7■■■■□ 23.4
MATR3P43243 AGPAT1-208ENST00000490711 2448 ntTSL 210.8□□□□□ -0.682e-7■■■■□ 23.4
MATR3P43243 ZFC3H1-212ENST00000552994 7597 ntTSL 1 (best)14.58□□□□□ -0.083e-7■■■■□ 23.4
MATR3P43243 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.083e-7■■■■□ 23.4
MATR3P43243 ZFC3H1-208ENST00000550712 571 ntTSL 45.68□□□□□ -1.53e-7■■■■□ 23.4
MATR3P43243 ATF7IP2-205ENST00000535850 1907 ntTSL 211.27□□□□□ -0.616e-7■■■■□ 23.4
MATR3P43243 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.49□□□□□ -1.216e-7■■■■□ 23.4
MATR3P43243 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.316e-7■■■■□ 23.4
MATR3P43243 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.2□□□□□ -1.427e-7■■■■□ 23.4
MATR3P43243 ATF7IP2-215ENST00000568027 3406 ntTSL 1 (best)5.82□□□□□ -1.487e-7■■■■□ 23.4
MATR3P43243 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.537e-7■■■■□ 23.4
MATR3P43243 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.4□□□□□ -1.716e-7■■■■□ 23.4
MATR3P43243 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.633e-6■■■■□ 23.4
MATR3P43243 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.63e-6■■■■□ 23.4
MATR3P43243 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.52■■□□□ 1.23e-6■■■■□ 23.4
MATR3P43243 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.582e-6■■■■□ 23.4
MATR3P43243 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.662e-6■■■■□ 23.4
MATR3P43243 DST-209ENST00000449297 2108 ntTSL 510.49□□□□□ -0.732e-6■■■■□ 23.4
MATR3P43243 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC10.42□□□□□ -0.742e-8■■■■□ 23.4
MATR3P43243 DENND1A-204ENST00000394215 1380 ntTSL 5 BASIC9.82□□□□□ -0.844e-8■■■■□ 23.4
MATR3P43243 DST-231ENST00000523967 2904 ntTSL 27.26□□□□□ -1.252e-6■■■■□ 23.4
MATR3P43243 DST-222ENST00000520645 4598 ntTSL 26.65□□□□□ -1.342e-6■■■■□ 23.4
MATR3P43243 LPP-211ENST00000459897 548 ntTSL 36.17□□□□□ -1.428e-7■■■■□ 23.4
MATR3P43243 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.452e-6■■■■□ 23.4
MATR3P43243 SOS1-208ENST00000474390 672 ntTSL 44.82□□□□□ -1.644e-12■■■■□ 23.4
MATR3P43243 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.822e-6■■■■□ 23.4
Retrieved 100 of 16,209 protein–RNA pairs in 81.4 ms