RNA–Protein interactions for RNA: ENST00000496424.2

LRMDA-208, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 2 BASIC

Gene LRMDA, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-208ENST00000496424 PELP1Q8IZL8 1130 aaKnown RBP12.63□□□□□ -0.39
LRMDA-208ENST00000496424 MYT1Q01538 1121 aa12.6□□□□□ -0.39
LRMDA-208ENST00000496424 TTBK1Q5TCY1 1321 aaPredicted RBP12.05□□□□□ -0.48
LRMDA-208ENST00000496424 SLC24A1O60721 1099 aa11.76□□□□□ -0.53
LRMDA-208ENST00000496424 ERICH6Q7L0X2 663 aa11.74□□□□□ -0.53
LRMDA-208ENST00000496424 PRKCSHP14314 528 aaPredicted RBP11.53□□□□□ -0.56
LRMDA-208ENST00000496424 NISCHQ9Y2I1 1504 aa11.31□□□□□ -0.6
LRMDA-208ENST00000496424 APLP2Q06481 763 aa11.21□□□□□ -0.61
LRMDA-208ENST00000496424 BCL11AQ9H165 835 aa11.21□□□□□ -0.61
LRMDA-208ENST00000496424 DAXXQ9UER7 740 aaPredicted RBP11.1□□□□□ -0.63
LRMDA-208ENST00000496424 CENPBP07199 599 aaPredicted RBP11.05□□□□□ -0.64
LRMDA-208ENST00000496424 HRCP23327 699 aa11.03□□□□□ -0.64
LRMDA-208ENST00000496424 EIF5BO60841 1220 aaKnown RBP10.98□□□□□ -0.65
LRMDA-208ENST00000496424 FAM9AQ8IZU1 332 aaPredicted RBP10.9□□□□□ -0.66
LRMDA-208ENST00000496424 SCAF1Q9H7N4 1312 aaKnown RBP10.88□□□□□ -0.67
LRMDA-208ENST00000496424 PPARGC1BQ86YN6 1023 aaKnown RBP10.66□□□□□ -0.7
LRMDA-208ENST00000496424 RANGAP1P46060 587 aaPredicted RBP10.63□□□□□ -0.71
LRMDA-208ENST00000496424 ANP32EQ9BTT0 268 aa10.57□□□□□ -0.72
LRMDA-208ENST00000496424 GTF3C3Q9Y5Q9 886 aa10.54□□□□□ -0.72
LRMDA-208ENST00000496424 PODXL2Q9NZ53 605 aa10.53□□□□□ -0.72
LRMDA-208ENST00000496424 ACIN1Q9UKV3 1341 aaKnown RBP10.52□□□□□ -0.73
LRMDA-208ENST00000496424 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
LRMDA-208ENST00000496424 PCGF6Q9BYE7 350 aa10.47□□□□□ -0.73
LRMDA-208ENST00000496424 ZEB1P37275 1124 aaPredicted RBP10.42□□□□□ -0.74
LRMDA-208ENST00000496424 UBE2Q2Q8WVN8 375 aa10.38□□□□□ -0.75
LRMDA-208ENST00000496424 CSRNP3Q8WYN3 585 aa10.36□□□□□ -0.75
LRMDA-208ENST00000496424 PKNOX2Q96KN3 472 aa10.35□□□□□ -0.75
LRMDA-208ENST00000496424 ANO8Q9HCE9 1232 aaPredicted RBP10.33□□□□□ -0.76
LRMDA-208ENST00000496424 NEFLP07196 543 aa10.31□□□□□ -0.76
LRMDA-208ENST00000496424 NEUROD1Q13562 356 aa10.31□□□□□ -0.76
LRMDA-208ENST00000496424 NCBP3Q53F19 620 aaKnown RBP10.31□□□□□ -0.76
LRMDA-208ENST00000496424 EHMT2Q96KQ7 1210 aa10.23□□□□□ -0.77
LRMDA-208ENST00000496424 GLIPR1L2Q4G1C9 344 aa10.21□□□□□ -0.78
LRMDA-208ENST00000496424 MYT1LQ9UL68 1186 aa10.17□□□□□ -0.78
LRMDA-208ENST00000496424 ARXQ96QS3 562 aa10.16□□□□□ -0.78
LRMDA-208ENST00000496424 CCDC136Q96JN2 1154 aa10.15□□□□□ -0.78
LRMDA-208ENST00000496424 PDE4CQ08493 712 aa10.14□□□□□ -0.79
LRMDA-208ENST00000496424 KLHL34Q8N239 644 aa10.12□□□□□ -0.79
LRMDA-208ENST00000496424 PDIA4P13667 645 aaKnown RBP10.11□□□□□ -0.79
LRMDA-208ENST00000496424 ERICH6BQ5W0A0 696 aa10.1□□□□□ -0.79
LRMDA-208ENST00000496424 CLSPNQ9HAW4 1339 aa10.07□□□□□ -0.8
LRMDA-208ENST00000496424 CCDC180Q9P1Z9 1646 aa10.07□□□□□ -0.8
LRMDA-208ENST00000496424 RTN4Q9NQC3 1192 aaKnown RBP10.06□□□□□ -0.8
LRMDA-208ENST00000496424 SALL2Q9Y467 1007 aaPredicted RBP10.06□□□□□ -0.8
LRMDA-208ENST00000496424 PLPPR3Q6T4P5 718 aa10.03□□□□□ -0.8
LRMDA-208ENST00000496424 CCER1Q8TC90 406 aaPredicted RBP10.02□□□□□ -0.8
LRMDA-208ENST00000496424 A0A0U1RQG5 324 aaPredicted RBP10.01□□□□□ -0.81
LRMDA-208ENST00000496424 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.01□□□□□ -0.81
LRMDA-208ENST00000496424 YTHDC1Q96MU7 727 aaKnown RBP9.99□□□□□ -0.81
LRMDA-208ENST00000496424 TIMELESSQ9UNS1 1208 aa9.98□□□□□ -0.81
LRMDA-208ENST00000496424 HOMEZQ8IX15 550 aa9.97□□□□□ -0.81
LRMDA-208ENST00000496424 TULP1O00294 542 aaPredicted RBP9.96□□□□□ -0.81
LRMDA-208ENST00000496424 DEKP35659 375 aaKnown RBP9.91□□□□□ -0.82
LRMDA-208ENST00000496424 DIEXFQ68CQ4 756 aaKnown RBP9.89□□□□□ -0.83
LRMDA-208ENST00000496424 TAF7LQ5H9L4 462 aa9.88□□□□□ -0.83
LRMDA-208ENST00000496424 TSHZ2Q9NRE2 1034 aa9.86□□□□□ -0.83
LRMDA-208ENST00000496424 BCL11BQ9C0K0 894 aaPredicted RBP9.86□□□□□ -0.83
LRMDA-208ENST00000496424 VSIG10Q8N0Z9 540 aa9.86□□□□□ -0.83
LRMDA-208ENST00000496424 TRIM26Q12899 539 aaPredicted RBP9.84□□□□□ -0.83
LRMDA-208ENST00000496424 RTL5Q5HYW3 569 aaPredicted RBP9.83□□□□□ -0.84
LRMDA-208ENST00000496424 ZNF326Q5BKZ1 582 aaKnown RBP9.82□□□□□ -0.84
LRMDA-208ENST00000496424 FGD1P98174 961 aa9.81□□□□□ -0.84
LRMDA-208ENST00000496424 HAP1P54257 671 aaPredicted RBP9.8□□□□□ -0.84
LRMDA-208ENST00000496424 AEBP2Q6ZN18 517 aaPredicted RBP9.8□□□□□ -0.84
LRMDA-208ENST00000496424 NPM2Q86SE8 214 aaKnown RBP9.79□□□□□ -0.84
LRMDA-208ENST00000496424 C14orf37Q86TY3 774 aa9.79□□□□□ -0.84
LRMDA-208ENST00000496424 ZMYND15Q9H091 742 aa9.76□□□□□ -0.85
LRMDA-208ENST00000496424 NAP1L5Q96NT1 182 aaPredicted RBP9.74□□□□□ -0.85
LRMDA-208ENST00000496424 DCAF8L2P0C7V8 631 aa9.74□□□□□ -0.85
LRMDA-208ENST00000496424 RBM10P98175 930 aaKnown RBP9.72□□□□□ -0.85
LRMDA-208ENST00000496424 AMER1Q5JTC6 1135 aaPredicted RBP9.71□□□□□ -0.86
LRMDA-208ENST00000496424 BRD2P25440 801 aaKnown RBP9.71□□□□□ -0.86
LRMDA-208ENST00000496424 DHX37Q8IY37 1157 aaKnown RBP9.7□□□□□ -0.86
LRMDA-208ENST00000496424 POLR3GLQ9BT43 218 aa9.69□□□□□ -0.86
LRMDA-208ENST00000496424 AAMPQ13685 434 aa9.67□□□□□ -0.86
LRMDA-208ENST00000496424 CHMP4AQ9BY43 222 aa9.67□□□□□ -0.86
LRMDA-208ENST00000496424 PAXIP1Q6ZW49 1069 aaPredicted RBP9.67□□□□□ -0.86
LRMDA-208ENST00000496424 SUPT16HQ9Y5B9 1047 aaKnown RBP9.66□□□□□ -0.86
LRMDA-208ENST00000496424 CDK11BP21127 795 aaKnown RBP9.64□□□□□ -0.87
LRMDA-208ENST00000496424 CDK11AQ9UQ88 783 aaPredicted RBP9.64□□□□□ -0.87
LRMDA-208ENST00000496424 RBM19Q9Y4C8 960 aaKnown RBP9.64□□□□□ -0.87
LRMDA-208ENST00000496424 RSPH6AQ9H0K4 717 aa9.63□□□□□ -0.87
LRMDA-208ENST00000496424 NBR1Q14596 966 aa9.61□□□□□ -0.87
LRMDA-208ENST00000496424 IL27Q8NEV9 243 aa9.59□□□□□ -0.87
LRMDA-208ENST00000496424 BCANQ96GW7 911 aa9.58□□□□□ -0.88
LRMDA-208ENST00000496424 CHIC1Q5VXU3 224 aa9.58□□□□□ -0.88
LRMDA-208ENST00000496424 ZNF316A6NFI3 1004 aaPredicted RBP9.54□□□□□ -0.88
LRMDA-208ENST00000496424 TPRNQ4KMQ1 711 aa9.54□□□□□ -0.88
LRMDA-208ENST00000496424 TAOK2Q9UL54 1235 aa9.53□□□□□ -0.88
LRMDA-208ENST00000496424 ZCCHC6Q5VYS8 1495 aaKnown RBP9.53□□□□□ -0.88
LRMDA-208ENST00000496424 HSP90AA2PQ14568 343 aaPredicted RBP9.52□□□□□ -0.89
LRMDA-208ENST00000496424 SHROOM4Q9ULL8 1493 aa9.52□□□□□ -0.89
LRMDA-208ENST00000496424 CNGB1Q14028 1251 aaPredicted RBP9.51□□□□□ -0.89
LRMDA-208ENST00000496424 NAP1L2Q9ULW6 460 aaPredicted RBP9.5□□□□□ -0.89
LRMDA-208ENST00000496424 DCAF1Q9Y4B6 1507 aa9.5□□□□□ -0.89
LRMDA-208ENST00000496424 NCLP19338 710 aaKnown RBP9.5□□□□□ -0.89
LRMDA-208ENST00000496424 HSP90B1P14625 803 aaKnown RBP9.48□□□□□ -0.89
LRMDA-208ENST00000496424 CANXP27824 592 aaKnown RBP9.48□□□□□ -0.89
LRMDA-208ENST00000496424 BBXQ8WY36 941 aaPredicted RBP9.47□□□□□ -0.89
LRMDA-208ENST00000496424 MYO15BQ96JP2 1530 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms