Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21■□□□□ 0.95
CCNFP41002 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCNFP41002 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CCNFP41002 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.99■□□□□ 0.95
CCNFP41002 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 AP005212.1-201ENST00000581547 1997 ntBASIC20.99■□□□□ 0.95
CCNFP41002 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCNFP41002 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.99■□□□□ 0.95
CCNFP41002 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCNFP41002 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.99■□□□□ 0.95
CCNFP41002 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 AC012414.1-201ENST00000556676 535 ntBASIC20.99■□□□□ 0.95
CCNFP41002 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.99■□□□□ 0.95
CCNFP41002 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.99■□□□□ 0.95
CCNFP41002 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.99■□□□□ 0.95
CCNFP41002 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.99■□□□□ 0.95
CCNFP41002 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.99■□□□□ 0.95
CCNFP41002 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.99■□□□□ 0.95
CCNFP41002 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.99■□□□□ 0.95
CCNFP41002 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNFP41002 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNFP41002 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.98■□□□□ 0.95
CCNFP41002 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNFP41002 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCNFP41002 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CCNFP41002 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNFP41002 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNFP41002 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.98■□□□□ 0.95
CCNFP41002 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.98■□□□□ 0.95
CCNFP41002 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.98■□□□□ 0.95
CCNFP41002 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.98■□□□□ 0.95
CCNFP41002 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCNFP41002 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.98■□□□□ 0.95
CCNFP41002 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.98■□□□□ 0.95
CCNFP41002 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNFP41002 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCNFP41002 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCNFP41002 AC006128.1-201ENST00000624704 1661 ntBASIC20.98■□□□□ 0.95
CCNFP41002 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNFP41002 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNFP41002 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCNFP41002 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNFP41002 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.98■□□□□ 0.95
CCNFP41002 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNFP41002 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCNFP41002 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCNFP41002 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNFP41002 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCNFP41002 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.97■□□□□ 0.95
CCNFP41002 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCNFP41002 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNFP41002 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCNFP41002 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.97■□□□□ 0.95
CCNFP41002 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCNFP41002 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.97■□□□□ 0.95
CCNFP41002 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCNFP41002 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.97■□□□□ 0.95
CCNFP41002 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNFP41002 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCNFP41002 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCNFP41002 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNFP41002 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.96■□□□□ 0.95
CCNFP41002 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNFP41002 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNFP41002 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNFP41002 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNFP41002 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CCNFP41002 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.96■□□□□ 0.95
CCNFP41002 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNFP41002 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNFP41002 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNFP41002 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNFP41002 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNFP41002 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNFP41002 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNFP41002 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNFP41002 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.96■□□□□ 0.95
CCNFP41002 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCNFP41002 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
CCNFP41002 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.95■□□□□ 0.94
CCNFP41002 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.95■□□□□ 0.94
CCNFP41002 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCNFP41002 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNFP41002 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNFP41002 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
CCNFP41002 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNFP41002 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.95■□□□□ 0.94
CCNFP41002 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.95■□□□□ 0.94
CCNFP41002 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms