Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX6P35712 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX6P35712 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX6P35712 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX6P35712 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX6P35712 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.71■□□□□ 0.59
SOX6P35712 YBX1P4-201ENST00000392794 808 ntBASIC18.71■□□□□ 0.59
SOX6P35712 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.71■□□□□ 0.59
SOX6P35712 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX6P35712 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.71■□□□□ 0.59
SOX6P35712 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX6P35712 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SOX6P35712 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX6P35712 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX6P35712 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX6P35712 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX6P35712 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.71■□□□□ 0.59
SOX6P35712 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SOX6P35712 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX6P35712 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SOX6P35712 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX6P35712 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SOX6P35712 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SOX6P35712 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.7■□□□□ 0.58
SOX6P35712 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SOX6P35712 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SOX6P35712 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SOX6P35712 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX6P35712 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.7■□□□□ 0.58
SOX6P35712 PVT1_1.1-201ENST00000615125 194 ntBASIC18.7■□□□□ 0.58
SOX6P35712 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX6P35712 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX6P35712 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX6P35712 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX6P35712 SMG8-203ENST00000578922 2178 ntBASIC18.69■□□□□ 0.58
SOX6P35712 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SOX6P35712 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX6P35712 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX6P35712 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SOX6P35712 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX6P35712 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.69■□□□□ 0.58
SOX6P35712 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SOX6P35712 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SOX6P35712 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SOX6P35712 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX6P35712 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX6P35712 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX6P35712 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX6P35712 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX6P35712 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX6P35712 AC018445.3-201ENST00000624177 1945 ntBASIC18.68■□□□□ 0.58
SOX6P35712 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX6P35712 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.68■□□□□ 0.58
SOX6P35712 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.68■□□□□ 0.58
SOX6P35712 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SOX6P35712 KRT8P33-201ENST00000508125 1423 ntBASIC18.68■□□□□ 0.58
SOX6P35712 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.68■□□□□ 0.58
SOX6P35712 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SOX6P35712 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SOX6P35712 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.68■□□□□ 0.58
SOX6P35712 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.68■□□□□ 0.58
SOX6P35712 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SOX6P35712 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.68■□□□□ 0.58
SOX6P35712 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.68■□□□□ 0.58
SOX6P35712 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX6P35712 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX6P35712 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX6P35712 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX6P35712 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX6P35712 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX6P35712 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX6P35712 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX6P35712 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX6P35712 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.67■□□□□ 0.58
SOX6P35712 MIR4508-201ENST00000584178 70 ntBASIC18.67■□□□□ 0.58
SOX6P35712 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX6P35712 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX6P35712 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.67■□□□□ 0.58
SOX6P35712 BX323043.1-201ENST00000641006 1765 ntBASIC18.67■□□□□ 0.58
SOX6P35712 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX6P35712 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.67■□□□□ 0.58
SOX6P35712 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOX6P35712 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SOX6P35712 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX6P35712 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX6P35712 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX6P35712 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX6P35712 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SOX6P35712 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX6P35712 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SOX6P35712 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SOX6P35712 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.66■□□□□ 0.58
SOX6P35712 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.66■□□□□ 0.58
SOX6P35712 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX6P35712 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX6P35712 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX6P35712 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX6P35712 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX6P35712 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX6P35712 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms