Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 KIZ-209ENST00000619179 1663 ntAPPRIS ALT2 TSL 53.55□□□□□ -1.844e-7■■■□□ 15.7
CSTF2P33240 KIZ-201ENST00000419359 517 ntTSL 22.99□□□□□ -1.934e-7■■■□□ 15.7
CSTF2P33240 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.841e-6■■■□□ 15.7
CSTF2P33240 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.454e-6■■■□□ 15.7
CSTF2P33240 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.43■□□□□ 0.224e-6■■■□□ 15.7
CSTF2P33240 RAB7A-207ENST00000491681 552 ntTSL 24.96□□□□□ -1.624e-6■■■□□ 15.7
CSTF2P33240 SFT2D1-202ENST00000478705 659 ntTSL 216.32■□□□□ 0.26e-9■■■□□ 15.7
CSTF2P33240 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.146e-9■■■□□ 15.7
CSTF2P33240 SFT2D1-204ENST00000487841 2576 ntTSL 1 (best)11.97□□□□□ -0.496e-9■■■□□ 15.7
CSTF2P33240 CSTF3-207ENST00000526480 479 ntTSL 36.14□□□□□ -1.431e-6■■■□□ 15.7
CSTF2P33240 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.63■□□□□ 0.413e-6■■■□□ 15.7
CSTF2P33240 RAPGEF5-208ENST00000471484 589 ntTSL 410.09□□□□□ -0.793e-6■■■□□ 15.7
CSTF2P33240 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.918e-8■■■□□ 15.7
CSTF2P33240 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.232e-6■■■□□ 15.6
CSTF2P33240 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC12.33□□□□□ -0.442e-6■■■□□ 15.6
CSTF2P33240 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.482e-6■■■□□ 15.6
CSTF2P33240 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.562e-6■■■□□ 15.6
CSTF2P33240 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.762e-6■■■□□ 15.6
CSTF2P33240 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.574e-6■■■□□ 15.6
CSTF2P33240 SLC20A2-212ENST00000523340 1265 ntTSL 223.52■■□□□ 1.364e-9■■■□□ 15.5
CSTF2P33240 SLC20A2-209ENST00000521455 411 ntTSL 317.82■□□□□ 0.444e-9■■■□□ 15.5
CSTF2P33240 SLC20A2-214ENST00000524237 545 ntTSL 415.62■□□□□ 0.094e-9■■■□□ 15.5
CSTF2P33240 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.264e-9■■■□□ 15.5
CSTF2P33240 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.444e-9■■■□□ 15.5
CSTF2P33240 SLC20A2-205ENST00000518717 573 ntTSL 48.52□□□□□ -1.054e-9■■■□□ 15.5
CSTF2P33240 SLC20A2-203ENST00000518384 557 ntTSL 47.77□□□□□ -1.174e-9■■■□□ 15.5
CSTF2P33240 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.18■■□□□ 1.34e-10■■■□□ 15.5
CSTF2P33240 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.54e-16■■■□□ 15.5
CSTF2P33240 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.094e-10■■■□□ 15.5
CSTF2P33240 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.564e-10■■■□□ 15.5
CSTF2P33240 RCC1-206ENST00000419074 997 ntTSL 512.7□□□□□ -0.382e-6■■■□□ 15.5
CSTF2P33240 C9orf3-206ENST00000428313 2288 ntTSL 1 (best)15.86■□□□□ 0.131e-6■■■□□ 15.5
CSTF2P33240 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.14□□□□□ -0.311e-6■■■□□ 15.5
CSTF2P33240 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.521e-6■■■□□ 15.5
CSTF2P33240 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.672e-8■■■□□ 15.4
CSTF2P33240 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.012e-8■■■□□ 15.4
CSTF2P33240 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.012e-8■■■□□ 15.4
CSTF2P33240 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.32e-8■■■□□ 15.4
CSTF2P33240 RNASE4-202ENST00000555597 1341 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.692e-8■■■□□ 15.4
CSTF2P33240 RNASE4-201ENST00000397995 853 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.942e-8■■■□□ 15.4
CSTF2P33240 ANG-203ENST00000554073 251 ntTSL 32.77□□□□□ -1.972e-8■■■□□ 15.4
CSTF2P33240 PEG3-203ENST00000594389 411 ntTSL 322.08■■□□□ 1.134e-10■■■□□ 15.4
CSTF2P33240 PEG3-204ENST00000594706 583 ntTSL 318.58■□□□□ 0.564e-10■■■□□ 15.4
CSTF2P33240 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.14■□□□□ 0.174e-10■■■□□ 15.4
CSTF2P33240 PEG3-209ENST00000599577 5052 ntAPPRIS P1 TSL 1 (best)15.06■□□□□ 04e-10■■■□□ 15.4
CSTF2P33240 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC12□□□□□ -0.494e-10■■■□□ 15.4
CSTF2P33240 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -14e-10■■■□□ 15.4
CSTF2P33240 PEG3-205ENST00000596261 570 ntTSL 48.13□□□□□ -1.114e-10■■■□□ 15.4
CSTF2P33240 TLE1-204ENST00000418319 936 ntTSL 514.91□□□□□ -0.022e-7■■■□□ 15.4
CSTF2P33240 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.232e-7■■■□□ 15.4
CSTF2P33240 RBM26-204ENST00000449987 3662 ntTSL 38.99□□□□□ -0.974e-12■■■□□ 15.4
CSTF2P33240 PRDM10-206ENST00000527581 620 ntTSL 316.36■□□□□ 0.218e-7■■■□□ 15.4
CSTF2P33240 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.99□□□□□ -0.338e-7■■■□□ 15.4
CSTF2P33240 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.338e-7■■■□□ 15.4
CSTF2P33240 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC9.91□□□□□ -0.828e-7■■■□□ 15.4
CSTF2P33240 PRDM10-208ENST00000531431 528 ntTSL 45.18□□□□□ -1.588e-7■■■□□ 15.4
CSTF2P33240 ITPR2-203ENST00000451599 2577 ntTSL 1 (best)9.59□□□□□ -0.873e-6■■■□□ 15.3
CSTF2P33240 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.316e-10■■■□□ 15.3
CSTF2P33240 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.316e-10■■■□□ 15.3
CSTF2P33240 DDX17-203ENST00000403230 2322 ntAPPRIS ALT2 TSL 1 (best)15.62■□□□□ 0.096e-10■■■□□ 15.3
CSTF2P33240 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.146e-10■■■□□ 15.3
CSTF2P33240 DDX17-201ENST00000216019 6441 ntTSL 1 (best)12.55□□□□□ -0.46e-10■■■□□ 15.3
CSTF2P33240 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC12.24□□□□□ -0.456e-10■■■□□ 15.3
CSTF2P33240 GABRE-202ENST00000417300 619 ntTSL 211.11□□□□□ -0.636e-10■■■□□ 15.3
CSTF2P33240 FILIP1L-210ENST00000495625 2898 ntTSL 1 (best)10.89□□□□□ -0.676e-10■■■□□ 15.3
CSTF2P33240 DDX17-205ENST00000432525 1354 ntTSL 210.42□□□□□ -0.746e-10■■■□□ 15.3
CSTF2P33240 DDX17-207ENST00000475004 443 ntTSL 39.79□□□□□ -0.846e-10■■■□□ 15.3
CSTF2P33240 GABRE-211ENST00000491339 2072 ntTSL 28.56□□□□□ -1.046e-10■■■□□ 15.3
CSTF2P33240 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.486e-10■■■□□ 15.3
CSTF2P33240 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.131e-7■■■□□ 15.3
CSTF2P33240 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.14■□□□□ 0.335e-7■■■□□ 15.3
CSTF2P33240 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC11.89□□□□□ -0.515e-7■■■□□ 15.3
CSTF2P33240 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.078e-7■■■□□ 15.3
CSTF2P33240 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.321e-6■■■□□ 15.3
CSTF2P33240 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.11e-6■■■□□ 15.3
CSTF2P33240 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.371e-6■■■□□ 15.3
CSTF2P33240 C9orf3-215ENST00000478473 895 ntTSL 323■■□□□ 1.271e-6■■■□□ 15.3
CSTF2P33240 C9orf3-213ENST00000471978 478 ntTSL 222.31■■□□□ 1.161e-6■■■□□ 15.3
CSTF2P33240 C9orf3-211ENST00000463372 919 ntTSL 313.67□□□□□ -0.221e-6■■■□□ 15.3
CSTF2P33240 ANKRD11-202ENST00000330736 8342 ntTSL 513.41□□□□□ -0.263e-7■■■□□ 15.3
CSTF2P33240 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.256e-7■■■□□ 15.2
CSTF2P33240 AC079781.5-201ENST00000641390 3211 nt17.42■□□□□ 0.382e-14■■■□□ 15.2
CSTF2P33240 AC004967.1-201ENST00000453589 447 ntBASIC16.71■□□□□ 0.272e-14■■■□□ 15.2
CSTF2P33240 AC079781.5-202ENST00000641784 3743 ntBASIC14.23□□□□□ -0.132e-14■■■□□ 15.2
CSTF2P33240 UTRN-207ENST00000432686 666 ntTSL 36.34□□□□□ -1.397e-7■■■□□ 15.2
CSTF2P33240 UTRN-201ENST00000367524 753 ntTSL 34□□□□□ -1.777e-7■■■□□ 15.2
CSTF2P33240 TRIO-221ENST00000513206 7995 ntTSL 515.79■□□□□ 0.123e-6■■■□□ 15.2
CSTF2P33240 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.023e-7■■■□□ 15.2
CSTF2P33240 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.68□□□□□ -0.383e-7■■■□□ 15.2
CSTF2P33240 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.433e-7■■■□□ 15.2
CSTF2P33240 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.37□□□□□ -0.433e-7■■■□□ 15.2
CSTF2P33240 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.963e-7■■■□□ 15.2
CSTF2P33240 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.213e-7■■■□□ 15.2
CSTF2P33240 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.327e-7■■■□□ 15.1
CSTF2P33240 GBE1-201ENST00000429644 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.552e-14■■■□□ 15.1
CSTF2P33240 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.83□□□□□ -0.22e-6■■■□□ 15.1
CSTF2P33240 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.272e-6■■■□□ 15.1
CSTF2P33240 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.571e-6■■■□□ 15
CSTF2P33240 ATRX-206ENST00000480283 10455 ntTSL 1 (best)3.62□□□□□ -1.831e-6■■■□□ 15
CSTF2P33240 IP6K2-212ENST00000433104 2490 ntTSL 216.82■□□□□ 0.285e-8■■■□□ 15
Retrieved 100 of 6,735 protein–RNA pairs in 365.4 ms