Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 ILK-206ENST00000526318 596 ntTSL 311.85□□□□□ -0.514e-7■■■■□ 26.5
U2AF2P26368 ILK-209ENST00000528784 947 ntTSL 29.83□□□□□ -0.844e-7■■■■□ 26.5
U2AF2P26368 ZFC3H1-209ENST00000550963 845 ntTSL 54.38□□□□□ -1.713e-10■■■■□ 26.5
U2AF2P26368 ZFC3H1-205ENST00000547398 470 ntTSL 23.82□□□□□ -1.85e-10■■■■□ 26.5
U2AF2P26368 AC087482.1-203ENST00000560662 331 ntTSL 39.75□□□□□ -0.851e-7■■■■□ 26.5
U2AF2P26368 AC087482.1-201ENST00000558097 540 ntTSL 48.32□□□□□ -1.081e-7■■■■□ 26.5
U2AF2P26368 CAPN7-203ENST00000418994 781 ntTSL 529.24■■■□□ 2.276e-7■■■■□ 26.4
U2AF2P26368 ST7L-219ENST00000480988 1857 ntTSL 228.95■■■□□ 2.236e-7■■■■□ 26.4
U2AF2P26368 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.39■■■□□ 2.136e-7■■■■□ 26.4
U2AF2P26368 ST7L-225ENST00000497235 859 ntTSL 327.9■■■□□ 2.066e-7■■■■□ 26.4
U2AF2P26368 CAPN7-205ENST00000457023 854 ntTSL 327.78■■■□□ 2.046e-7■■■■□ 26.4
U2AF2P26368 NUP210-202ENST00000420141 3134 ntTSL 1 (best)26.9■■□□□ 1.96e-7■■■■□ 26.4
U2AF2P26368 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.7■■□□□ 1.866e-7■■■■□ 26.4
U2AF2P26368 TPST1-204ENST00000480281 924 ntTSL 1 (best)26.64■■□□□ 1.866e-7■■■■□ 26.4
U2AF2P26368 BACE1-210ENST00000514464 517 ntTSL 225.45■■□□□ 1.666e-7■■■■□ 26.4
U2AF2P26368 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.646e-7■■■■□ 26.4
U2AF2P26368 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.09■■□□□ 1.616e-7■■■■□ 26.4
U2AF2P26368 ST7L-226ENST00000497457 1582 ntTSL 1 (best)24.74■■□□□ 1.556e-7■■■■□ 26.4
U2AF2P26368 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.536e-7■■■■□ 26.4
U2AF2P26368 CHMP7-205ENST00000519503 917 ntTSL 224.01■■□□□ 1.436e-7■■■■□ 26.4
U2AF2P26368 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.2■■□□□ 1.36e-7■■■■□ 26.4
U2AF2P26368 IFT140-210ENST00000569646 643 ntTSL 322.79■■□□□ 1.246e-7■■■■□ 26.4
U2AF2P26368 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.49■■□□□ 1.196e-7■■■■□ 26.4
U2AF2P26368 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.15■■□□□ 1.146e-7■■■■□ 26.4
U2AF2P26368 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.01■■□□□ 1.116e-7■■■■□ 26.4
U2AF2P26368 CRYM-AS1-203ENST00000561968 559 ntTSL 521.69■■□□□ 1.066e-7■■■■□ 26.4
U2AF2P26368 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.64■■□□□ 1.056e-7■■■■□ 26.4
U2AF2P26368 TTC6-210ENST00000556845 511 ntTSL 321.41■■□□□ 1.026e-7■■■■□ 26.4
U2AF2P26368 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 16e-7■■■■□ 26.4
U2AF2P26368 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.91■□□□□ 0.946e-7■■■■□ 26.4
U2AF2P26368 ST7L-213ENST00000470519 834 ntTSL 520.89■□□□□ 0.936e-7■■■■□ 26.4
U2AF2P26368 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.66■□□□□ 0.96e-7■■■■□ 26.4
U2AF2P26368 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.79■□□□□ 0.766e-7■■■■□ 26.4
U2AF2P26368 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.746e-7■■■■□ 26.4
U2AF2P26368 MCRS1-213ENST00000551625 2450 ntTSL 1 (best)19.65■□□□□ 0.746e-7■■■■□ 26.4
U2AF2P26368 CHMP7-203ENST00000517325 2639 ntTSL 219.34■□□□□ 0.696e-7■■■■□ 26.4
U2AF2P26368 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.3■□□□□ 0.686e-7■■■■□ 26.4
U2AF2P26368 PRPF40A-204ENST00000450303 496 ntTSL 319.14■□□□□ 0.656e-7■■■■□ 26.4
U2AF2P26368 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.98■□□□□ 0.636e-7■■■■□ 26.4
U2AF2P26368 KIAA1524-205ENST00000487834 2014 ntTSL 1 (best)18.93■□□□□ 0.626e-7■■■■□ 26.4
U2AF2P26368 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.66e-7■■■■□ 26.4
U2AF2P26368 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.586e-7■■■■□ 26.4
U2AF2P26368 CDKN1B-203ENST00000442489 577 ntTSL 518.64■□□□□ 0.576e-7■■■■□ 26.4
U2AF2P26368 AC090825.1-201ENST00000559714 542 ntTSL 418.4■□□□□ 0.546e-7■■■■□ 26.4
U2AF2P26368 MCRS1-208ENST00000548646 608 ntTSL 318.13■□□□□ 0.496e-7■■■■□ 26.4
U2AF2P26368 MCRS1-204ENST00000547182 724 ntTSL 318.13■□□□□ 0.496e-7■■■■□ 26.4
U2AF2P26368 MCRS1-212ENST00000551598 636 ntTSL 518.13■□□□□ 0.496e-7■■■■□ 26.4
U2AF2P26368 ST7L-209ENST00000459630 765 ntTSL 517.77■□□□□ 0.446e-7■■■■□ 26.4
U2AF2P26368 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.66■□□□□ 0.426e-7■■■■□ 26.4
U2AF2P26368 DECR1-209ENST00000519410 705 ntTSL 517.65■□□□□ 0.426e-7■■■■□ 26.4
U2AF2P26368 IFT140-204ENST00000439987 2580 ntTSL 217.28■□□□□ 0.366e-7■■■■□ 26.4
U2AF2P26368 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.336e-7■■■■□ 26.4
U2AF2P26368 CHMP7-210ENST00000523091 2672 ntTSL 1 (best)17.11■□□□□ 0.336e-7■■■■□ 26.4
U2AF2P26368 MCRS1-207ENST00000548602 1666 ntTSL 1 (best)17.09■□□□□ 0.336e-7■■■■□ 26.4
U2AF2P26368 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.03■□□□□ 0.326e-7■■■■□ 26.4
U2AF2P26368 SLC38A6-210ENST00000527591 1689 ntTSL 1 (best)16.96■□□□□ 0.316e-7■■■■□ 26.4
U2AF2P26368 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.36e-7■■■■□ 26.4
U2AF2P26368 RAF1-202ENST00000416093 962 ntTSL 216.87■□□□□ 0.291e-9■■■■□ 26.4
U2AF2P26368 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.277e-13■■■■□ 26.4
U2AF2P26368 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.256e-7■■■■□ 26.4
U2AF2P26368 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.246e-7■■■■□ 26.4
U2AF2P26368 RBPMS-220ENST00000523717 886 ntTSL 316.53■□□□□ 0.246e-7■■■■□ 26.4
U2AF2P26368 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.226e-7■■■■□ 26.4
U2AF2P26368 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.216e-7■■■■□ 26.4
U2AF2P26368 IFT140-207ENST00000566052 544 ntTSL 216.32■□□□□ 0.26e-7■■■■□ 26.4
U2AF2P26368 DECR1-203ENST00000517314 654 ntTSL 516.13■□□□□ 0.176e-7■■■■□ 26.4
U2AF2P26368 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.94■□□□□ 0.146e-7■■■■□ 26.4
U2AF2P26368 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.127e-13■■■■□ 26.4
U2AF2P26368 MCRS1-215ENST00000552596 669 ntTSL 215.74■□□□□ 0.116e-7■■■■□ 26.4
U2AF2P26368 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.16e-7■■■■□ 26.4
U2AF2P26368 IFT140-211ENST00000569812 452 ntTSL 515.62■□□□□ 0.096e-7■■■■□ 26.4
U2AF2P26368 OSBPL3-210ENST00000415952 568 ntTSL 415.51■□□□□ 0.076e-7■■■■□ 26.4
U2AF2P26368 ST7L-222ENST00000490715 4483 ntTSL 1 (best)15.18■□□□□ 0.026e-7■■■■□ 26.4
U2AF2P26368 BACE1-205ENST00000504995 611 ntTSL 315.17■□□□□ 0.026e-7■■■■□ 26.4
U2AF2P26368 ST7L-204ENST00000361846 4348 ntTSL 1 (best)15.09■□□□□ 0.016e-7■■■■□ 26.4
U2AF2P26368 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC14.96□□□□□ -0.017e-13■■■■□ 26.4
U2AF2P26368 PTK2-226ENST00000520917 653 ntTSL 414.68□□□□□ -0.066e-7■■■■□ 26.4
U2AF2P26368 KIAA1524-204ENST00000481530 2764 ntTSL 1 (best)14.63□□□□□ -0.076e-7■■■■□ 26.4
U2AF2P26368 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.17e-13■■■■□ 26.4
U2AF2P26368 ATAT1-201ENST00000318999 2611 ntTSL 1 (best) BASIC14.11□□□□□ -0.157e-13■■■■□ 26.4
U2AF2P26368 AP000892.2-201ENST00000613535 324 ntBASIC14.06□□□□□ -0.166e-7■■■■□ 26.4
U2AF2P26368 BDP1-204ENST00000508917 7194 ntTSL 1 (best)14.06□□□□□ -0.166e-7■■■■□ 26.4
U2AF2P26368 CDYL-202ENST00000343762 3241 ntTSL 1 (best) BASIC14.02□□□□□ -0.176e-7■■■■□ 26.4
U2AF2P26368 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC13.59□□□□□ -0.236e-7■■■■□ 26.4
U2AF2P26368 FAM118A-208ENST00000462361 712 ntTSL 213.43□□□□□ -0.266e-7■■■■□ 26.4
U2AF2P26368 RBPMS-205ENST00000517860 1076 ntTSL 2 BASIC13.39□□□□□ -0.276e-7■■■■□ 26.4
U2AF2P26368 ATAT1-203ENST00000329992 2119 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.297e-13■■■■□ 26.4
U2AF2P26368 SMARCAL1-203ENST00000392128 2431 ntAPPRIS ALT2 TSL 1 (best)13.27□□□□□ -0.296e-7■■■■□ 26.4
U2AF2P26368 TRIQK-215ENST00000522903 556 ntTSL 413.24□□□□□ -0.296e-7■■■■□ 26.4
U2AF2P26368 NLGN4Y-201ENST00000339174 5310 ntAPPRIS P1 TSL 1 (best)13.24□□□□□ -0.293e-7■■■■□ 26.4
U2AF2P26368 ZNF682-211ENST00000601100 609 ntTSL 413.14□□□□□ -0.316e-7■■■■□ 26.4
U2AF2P26368 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.316e-7■■■■□ 26.4
U2AF2P26368 MYO10-212ENST00000515803 4839 ntTSL 2 BASIC13.03□□□□□ -0.326e-7■■■■□ 26.4
U2AF2P26368 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.346e-7■■■■□ 26.4
U2AF2P26368 ST7L-210ENST00000463235 2574 ntTSL 1 (best)12.84□□□□□ -0.356e-7■■■■□ 26.4
U2AF2P26368 ZNF682-202ENST00000397162 3164 ntTSL 4 BASIC12.76□□□□□ -0.376e-7■■■■□ 26.4
U2AF2P26368 THRB-201ENST00000280696 1718 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.386e-7■■■■□ 26.4
U2AF2P26368 ST7L-203ENST00000360743 4206 ntTSL 1 (best) BASIC12.69□□□□□ -0.386e-7■■■■□ 26.4
U2AF2P26368 ZNF682-203ENST00000397165 3245 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.386e-7■■■■□ 26.4
U2AF2P26368 SLC38A6-207ENST00000525723 2787 ntTSL 212.52□□□□□ -0.416e-7■■■■□ 26.4
Retrieved 100 of 36,523 protein–RNA pairs in 576.2 ms