RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 NISCHQ9Y2I1 1504 aa31.47■■■□□ 2.63
CHMP7-210ENST00000523091 CCDC180Q9P1Z9 1646 aa26.84■■□□□ 1.89
CHMP7-210ENST00000523091 SHROOM4Q9ULL8 1493 aa26.69■■□□□ 1.86
CHMP7-210ENST00000523091 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
CHMP7-210ENST00000523091 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
CHMP7-210ENST00000523091 SUPT5HO00267 1087 aaKnown RBP26.02■■□□□ 1.76
CHMP7-210ENST00000523091 DCAF1Q9Y4B6 1507 aa25.77■■□□□ 1.72
CHMP7-210ENST00000523091 ABCC9O60706 1549 aa25.2■■□□□ 1.62
CHMP7-210ENST00000523091 SCRIBQ14160 1630 aa25.18■■□□□ 1.62
CHMP7-210ENST00000523091 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.61
CHMP7-210ENST00000523091 MYO15BQ96JP2 1530 aa25.13■■□□□ 1.61
CHMP7-210ENST00000523091 NACADO15069 1562 aa24.9■■□□□ 1.58
CHMP7-210ENST00000523091 RSF1Q96T23 1441 aaPredicted RBP24.81■■□□□ 1.56
CHMP7-210ENST00000523091 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
CHMP7-210ENST00000523091 RB1CC1Q8TDY2 1594 aa24.56■■□□□ 1.52
CHMP7-210ENST00000523091 MROH2BQ7Z745 1585 aa24.48■■□□□ 1.51
CHMP7-210ENST00000523091 LOC105371045A0A1W2PR82 267 aa24.43■■□□□ 1.5
CHMP7-210ENST00000523091 WIZO95785 1651 aa24.33■■□□□ 1.49
CHMP7-210ENST00000523091 TRIM41Q8WV44 630 aa24.24■■□□□ 1.47
CHMP7-210ENST00000523091 UNC13AQ9UPW8 1703 aa24.22■■□□□ 1.47
CHMP7-210ENST00000523091 BAZ1AQ9NRL2 1556 aaPredicted RBP24.17■■□□□ 1.46
CHMP7-210ENST00000523091 PABPN1Q86U42 306 aaKnown RBP eCLIP24.08■■□□□ 1.45
CHMP7-210ENST00000523091 FAM9AQ8IZU1 332 aaPredicted RBP24.07■■□□□ 1.44
CHMP7-210ENST00000523091 PCGF6Q9BYE7 350 aa24.07■■□□□ 1.44
CHMP7-210ENST00000523091 SMARCA4P51532 1647 aa24.02■■□□□ 1.44
CHMP7-210ENST00000523091 BICRAQ9NZM4 1560 aa23.95■■□□□ 1.42
CHMP7-210ENST00000523091 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
CHMP7-210ENST00000523091 TOP2AP11388 1531 aaKnown RBP23.9■■□□□ 1.42
CHMP7-210ENST00000523091 CCDC88BA6NC98 1476 aa23.84■■□□□ 1.41
CHMP7-210ENST00000523091 EIF4G1Q04637 1599 aaKnown RBP23.83■■□□□ 1.41
CHMP7-210ENST00000523091 HRCP23327 699 aa23.82■■□□□ 1.4
CHMP7-210ENST00000523091 SMARCA2P51531 1590 aa23.78■■□□□ 1.4
CHMP7-210ENST00000523091 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
CHMP7-210ENST00000523091 TRIM26Q12899 539 aaPredicted RBP23.64■■□□□ 1.37
CHMP7-210ENST00000523091 PEG3Q9GZU2 1588 aa23.55■■□□□ 1.36
CHMP7-210ENST00000523091 ATAD2BQ9ULI0 1458 aa23.49■■□□□ 1.35
CHMP7-210ENST00000523091 PPARGC1BQ86YN6 1023 aaKnown RBP23.46■■□□□ 1.35
CHMP7-210ENST00000523091 SOGA1O94964 1423 aa23.42■■□□□ 1.34
CHMP7-210ENST00000523091 BAZ1BQ9UIG0 1483 aaKnown RBP23.4■■□□□ 1.34
CHMP7-210ENST00000523091 RUSC2Q8N2Y8 1516 aa23.34■■□□□ 1.33
CHMP7-210ENST00000523091 WRNQ14191 1432 aaPredicted RBP eCLIP23.3■■□□□ 1.32
CHMP7-210ENST00000523091 CSRNP3Q8WYN3 585 aa23.24■■□□□ 1.31
CHMP7-210ENST00000523091 SYNJ1O43426 1573 aa23.21■■□□□ 1.31
CHMP7-210ENST00000523091 EEA1Q15075 1411 aa23.16■■□□□ 1.3
CHMP7-210ENST00000523091 UBTFP17480 764 aaKnown RBP23.14■■□□□ 1.29
CHMP7-210ENST00000523091 CEP162Q5TB80 1403 aa23.14■■□□□ 1.29
CHMP7-210ENST00000523091 TNIKQ9UKE5 1360 aa23.11■■□□□ 1.29
CHMP7-210ENST00000523091 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
CHMP7-210ENST00000523091 PELP1Q8IZL8 1130 aaKnown RBP23.06■■□□□ 1.28
CHMP7-210ENST00000523091 TTBK1Q5TCY1 1321 aaPredicted RBP23.05■■□□□ 1.28
CHMP7-210ENST00000523091 GOLGA3Q08378 1498 aa23.02■■□□□ 1.28
CHMP7-210ENST00000523091 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
CHMP7-210ENST00000523091 ZEB1P37275 1124 aaPredicted RBP22.93■■□□□ 1.26
CHMP7-210ENST00000523091 TOP2BQ02880 1626 aa22.92■■□□□ 1.26
CHMP7-210ENST00000523091 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
CHMP7-210ENST00000523091 KIF21BO75037 1637 aa22.88■■□□□ 1.25
CHMP7-210ENST00000523091 RAPGEF2Q9Y4G8 1499 aa22.85■■□□□ 1.25
CHMP7-210ENST00000523091 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
CHMP7-210ENST00000523091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.82■■□□□ 1.24
CHMP7-210ENST00000523091 RANGAP1P46060 587 aaPredicted RBP22.82■■□□□ 1.24
CHMP7-210ENST00000523091 CFTRP13569 1480 aa22.81■■□□□ 1.24
CHMP7-210ENST00000523091 CUX1P39880 1505 aa22.8■■□□□ 1.24
CHMP7-210ENST00000523091 CLIP1P30622 1438 aa22.77■■□□□ 1.24
CHMP7-210ENST00000523091 CCER1Q8TC90 406 aaPredicted RBP22.7■■□□□ 1.22
CHMP7-210ENST00000523091 CC2D2AQ9P2K1 1620 aa22.67■■□□□ 1.22
CHMP7-210ENST00000523091 PRXQ9BXM0 1461 aa22.63■■□□□ 1.21
CHMP7-210ENST00000523091 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
CHMP7-210ENST00000523091 VPS8Q8N3P4 1428 aa22.62■■□□□ 1.21
CHMP7-210ENST00000523091 KIF27Q86VH2 1401 aa22.59■■□□□ 1.21
CHMP7-210ENST00000523091 PRDM2Q13029 1718 aa22.56■■□□□ 1.2
CHMP7-210ENST00000523091 ERICH3Q5RHP9 1530 aa22.56■■□□□ 1.2
CHMP7-210ENST00000523091 APLP2Q06481 763 aa22.51■■□□□ 1.19
CHMP7-210ENST00000523091 HNRNPUL2Q1KMD3 747 aaKnown RBP22.47■■□□□ 1.19
CHMP7-210ENST00000523091 CUX2O14529 1486 aa22.47■■□□□ 1.19
CHMP7-210ENST00000523091 ARAP1Q96P48 1450 aa22.45■■□□□ 1.18
CHMP7-210ENST00000523091 FGD5Q6ZNL6 1462 aa22.43■■□□□ 1.18
CHMP7-210ENST00000523091 IGF1RP08069 1367 aa22.41■■□□□ 1.18
CHMP7-210ENST00000523091 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
CHMP7-210ENST00000523091 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.17
CHMP7-210ENST00000523091 NESP48681 1621 aa22.39■■□□□ 1.17
CHMP7-210ENST00000523091 KANK4Q5T7N3 995 aaPredicted RBP22.34■■□□□ 1.17
CHMP7-210ENST00000523091 ARHGAP35Q9NRY4 1499 aa22.31■■□□□ 1.16
CHMP7-210ENST00000523091 CARMIL1Q5VZK9 1371 aa22.31■■□□□ 1.16
CHMP7-210ENST00000523091 DNAJC5BQ9UF47 199 aa22.29■■□□□ 1.16
CHMP7-210ENST00000523091 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
CHMP7-210ENST00000523091 TOPBP1Q92547 1522 aa22.23■■□□□ 1.15
CHMP7-210ENST00000523091 DNMBPQ6XZF7 1577 aa22.22■■□□□ 1.15
CHMP7-210ENST00000523091 MYT1Q01538 1121 aa22.22■■□□□ 1.15
CHMP7-210ENST00000523091 POLA1P09884 1462 aaPredicted RBP22.21■■□□□ 1.15
CHMP7-210ENST00000523091 ABCA10Q8WWZ4 1543 aa22.14■■□□□ 1.13
CHMP7-210ENST00000523091 P3H3Q8IVL6 736 aa22.13■■□□□ 1.13
CHMP7-210ENST00000523091 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
CHMP7-210ENST00000523091 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
CHMP7-210ENST00000523091 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
CHMP7-210ENST00000523091 RRBP1Q9P2E9 1410 aaKnown RBP22.04■■□□□ 1.12
CHMP7-210ENST00000523091 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
CHMP7-210ENST00000523091 ITGAEP38570 1179 aa22.01■■□□□ 1.11
CHMP7-210ENST00000523091 PDS5BQ9NTI5 1447 aa22■■□□□ 1.11
CHMP7-210ENST00000523091 ATP1B4Q9UN42 357 aaPredicted RBP22■■□□□ 1.11
CHMP7-210ENST00000523091 CCNB3Q8WWL7 1395 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms