RNA–Protein interactions for RNA: ENST00000280696.9

THRB-201, Transcript of thyroid hormone receptor beta, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene THRB, Length 1,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRB-201ENST00000280696 NISCHQ9Y2I1 1504 aa22.29■■□□□ 1.16
THRB-201ENST00000280696 SHROOM4Q9ULL8 1493 aa18.94■□□□□ 0.62
THRB-201ENST00000280696 CCDC180Q9P1Z9 1646 aa18.94■□□□□ 0.62
THRB-201ENST00000280696 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
THRB-201ENST00000280696 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
THRB-201ENST00000280696 DCAF8L2P0C7V8 631 aa18.45■□□□□ 0.54
THRB-201ENST00000280696 DCAF1Q9Y4B6 1507 aa18.38■□□□□ 0.53
THRB-201ENST00000280696 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
THRB-201ENST00000280696 MYO15BQ96JP2 1530 aa18.06■□□□□ 0.48
THRB-201ENST00000280696 HRCP23327 699 aa17.96■□□□□ 0.47
THRB-201ENST00000280696 PCGF6Q9BYE7 350 aa17.81■□□□□ 0.44
THRB-201ENST00000280696 ABCC9O60706 1549 aa17.78■□□□□ 0.44
THRB-201ENST00000280696 LOC105371045A0A1W2PR82 267 aa17.68■□□□□ 0.42
THRB-201ENST00000280696 RSF1Q96T23 1441 aaPredicted RBP17.66■□□□□ 0.42
THRB-201ENST00000280696 SCRIBQ14160 1630 aa17.64■□□□□ 0.41
THRB-201ENST00000280696 TRIM26Q12899 539 aaPredicted RBP17.6■□□□□ 0.41
THRB-201ENST00000280696 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
THRB-201ENST00000280696 NACADO15069 1562 aa17.53■□□□□ 0.4
THRB-201ENST00000280696 RB1CC1Q8TDY2 1594 aa17.53■□□□□ 0.4
THRB-201ENST00000280696 ZEB1P37275 1124 aaPredicted RBP17.41■□□□□ 0.38
THRB-201ENST00000280696 PPARGC1BQ86YN6 1023 aaKnown RBP17.37■□□□□ 0.37
THRB-201ENST00000280696 CECR2Q9BXF3 1484 aa17.28■□□□□ 0.36
THRB-201ENST00000280696 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
THRB-201ENST00000280696 FAM9AQ8IZU1 332 aaPredicted RBP17.27■□□□□ 0.35
THRB-201ENST00000280696 MROH2BQ7Z745 1585 aa17.26■□□□□ 0.35
THRB-201ENST00000280696 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
THRB-201ENST00000280696 WIZO95785 1651 aa17.15■□□□□ 0.34
THRB-201ENST00000280696 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
THRB-201ENST00000280696 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
THRB-201ENST00000280696 EIF4G1Q04637 1599 aaKnown RBP16.95■□□□□ 0.3
THRB-201ENST00000280696 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
THRB-201ENST00000280696 CCDC88BA6NC98 1476 aa16.89■□□□□ 0.29
THRB-201ENST00000280696 EEA1Q15075 1411 aa16.86■□□□□ 0.29
THRB-201ENST00000280696 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
THRB-201ENST00000280696 WRNQ14191 1432 aaPredicted RBP eCLIP16.82■□□□□ 0.28
THRB-201ENST00000280696 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
THRB-201ENST00000280696 TNIKQ9UKE5 1360 aa16.79■□□□□ 0.28
THRB-201ENST00000280696 ABCC8Q09428 1581 aa16.77■□□□□ 0.28
THRB-201ENST00000280696 CSRNP3Q8WYN3 585 aa16.77■□□□□ 0.28
THRB-201ENST00000280696 UNC13AQ9UPW8 1703 aa16.73■□□□□ 0.27
THRB-201ENST00000280696 CEP162Q5TB80 1403 aa16.73■□□□□ 0.27
THRB-201ENST00000280696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
THRB-201ENST00000280696 UBTFP17480 764 aaKnown RBP16.7■□□□□ 0.26
THRB-201ENST00000280696 SOGA1O94964 1423 aa16.69■□□□□ 0.26
THRB-201ENST00000280696 GOLGA3Q08378 1498 aa16.65■□□□□ 0.26
THRB-201ENST00000280696 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
THRB-201ENST00000280696 PELP1Q8IZL8 1130 aaKnown RBP16.64■□□□□ 0.25
THRB-201ENST00000280696 PABPN1Q86U42 306 aaKnown RBP eCLIP16.62■□□□□ 0.25
THRB-201ENST00000280696 BICRAQ9NZM4 1560 aa16.59■□□□□ 0.25
THRB-201ENST00000280696 RUSC2Q8N2Y8 1516 aa16.56■□□□□ 0.24
THRB-201ENST00000280696 CEP164Q9UPV0 1460 aa16.55■□□□□ 0.24
THRB-201ENST00000280696 DIEXFQ68CQ4 756 aaKnown RBP16.52■□□□□ 0.24
THRB-201ENST00000280696 TTBK1Q5TCY1 1321 aaPredicted RBP16.52■□□□□ 0.23
THRB-201ENST00000280696 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
THRB-201ENST00000280696 KIF21BO75037 1637 aa16.49■□□□□ 0.23
THRB-201ENST00000280696 ATAD2BQ9ULI0 1458 aa16.49■□□□□ 0.23
THRB-201ENST00000280696 CENPBP07199 599 aaPredicted RBP16.48■□□□□ 0.23
THRB-201ENST00000280696 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
THRB-201ENST00000280696 APLP2Q06481 763 aa16.48■□□□□ 0.23
THRB-201ENST00000280696 ACIN1Q9UKV3 1341 aaKnown RBP16.45■□□□□ 0.22
THRB-201ENST00000280696 CLIP1P30622 1438 aa16.44■□□□□ 0.22
THRB-201ENST00000280696 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
THRB-201ENST00000280696 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
THRB-201ENST00000280696 VPS8Q8N3P4 1428 aa16.39■□□□□ 0.21
THRB-201ENST00000280696 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
THRB-201ENST00000280696 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
THRB-201ENST00000280696 NEUROD1Q13562 356 aa16.31■□□□□ 0.2
THRB-201ENST00000280696 TOP2BQ02880 1626 aa16.31■□□□□ 0.2
THRB-201ENST00000280696 RAPGEF2Q9Y4G8 1499 aa16.29■□□□□ 0.2
THRB-201ENST00000280696 ERICH3Q5RHP9 1530 aa16.24■□□□□ 0.19
THRB-201ENST00000280696 BIVM-ERCC5R4GMW8 1640 aa16.23■□□□□ 0.19
THRB-201ENST00000280696 CLSPNQ9HAW4 1339 aa16.22■□□□□ 0.19
THRB-201ENST00000280696 NCAPD3P42695 1498 aa16.21■□□□□ 0.19
THRB-201ENST00000280696 GTF3C3Q9Y5Q9 886 aa16.21■□□□□ 0.19
THRB-201ENST00000280696 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
THRB-201ENST00000280696 PRXQ9BXM0 1461 aa16.19■□□□□ 0.18
THRB-201ENST00000280696 RANGAP1P46060 587 aaPredicted RBP16.19■□□□□ 0.18
THRB-201ENST00000280696 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
THRB-201ENST00000280696 MIER1Q8N108 512 aa16.08■□□□□ 0.17
THRB-201ENST00000280696 ARAP1Q96P48 1450 aa16.08■□□□□ 0.16
THRB-201ENST00000280696 CFTRP13569 1480 aa16.08■□□□□ 0.16
THRB-201ENST00000280696 CUX1P39880 1505 aa16.07■□□□□ 0.16
THRB-201ENST00000280696 YTHDC1Q96MU7 727 aaKnown RBP16.02■□□□□ 0.16
THRB-201ENST00000280696 DHX57Q6P158 1386 aaKnown RBP16.02■□□□□ 0.16
THRB-201ENST00000280696 RRBP1Q9P2E9 1410 aaKnown RBP16.02■□□□□ 0.15
THRB-201ENST00000280696 KANK4Q5T7N3 995 aaPredicted RBP16.02■□□□□ 0.15
THRB-201ENST00000280696 CCNB3Q8WWL7 1395 aa15.97■□□□□ 0.15
THRB-201ENST00000280696 CUX2O14529 1486 aa15.95■□□□□ 0.14
THRB-201ENST00000280696 ARHGAP35Q9NRY4 1499 aa15.95■□□□□ 0.14
THRB-201ENST00000280696 MAP3K1Q13233 1512 aa15.92■□□□□ 0.14
THRB-201ENST00000280696 IGF1RP08069 1367 aa15.92■□□□□ 0.14
THRB-201ENST00000280696 MYT1Q01538 1121 aa15.91■□□□□ 0.14
THRB-201ENST00000280696 CADPSQ9ULU8 1353 aa15.91■□□□□ 0.14
THRB-201ENST00000280696 PRDM2Q13029 1718 aa15.89■□□□□ 0.13
THRB-201ENST00000280696 CARMIL1Q5VZK9 1371 aa15.89■□□□□ 0.13
THRB-201ENST00000280696 FHAD1B1AJZ9 1412 aa15.85■□□□□ 0.13
THRB-201ENST00000280696 ITGAEP38570 1179 aa15.83■□□□□ 0.13
THRB-201ENST00000280696 TIAM1Q13009 1591 aa15.81■□□□□ 0.12
THRB-201ENST00000280696 FGD5Q6ZNL6 1462 aa15.8■□□□□ 0.12
THRB-201ENST00000280696 SETD5Q9C0A6 1442 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms