Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 AC105265.2-201ENST00000467189 838 ntBASIC18.13■□□□□ 0.49
ACKR3P25106 AL358852.1-201ENST00000623174 1268 ntBASIC18.13■□□□□ 0.49
ACKR3P25106 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACKR3P25106 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ACKR3P25106 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ACKR3P25106 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ACKR3P25106 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACKR3P25106 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACKR3P25106 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACKR3P25106 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACKR3P25106 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACKR3P25106 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACKR3P25106 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACKR3P25106 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ACKR3P25106 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ACKR3P25106 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
ACKR3P25106 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.12■□□□□ 0.49
ACKR3P25106 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.12■□□□□ 0.49
ACKR3P25106 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ACKR3P25106 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACKR3P25106 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ACKR3P25106 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACKR3P25106 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACKR3P25106 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACKR3P25106 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACKR3P25106 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ACKR3P25106 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.11■□□□□ 0.49
ACKR3P25106 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.11■□□□□ 0.49
ACKR3P25106 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.11■□□□□ 0.49
ACKR3P25106 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.11■□□□□ 0.49
ACKR3P25106 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACKR3P25106 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.11■□□□□ 0.49
ACKR3P25106 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACKR3P25106 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACKR3P25106 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.11■□□□□ 0.49
ACKR3P25106 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ACKR3P25106 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ACKR3P25106 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.11■□□□□ 0.49
ACKR3P25106 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACKR3P25106 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ACKR3P25106 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.11■□□□□ 0.49
ACKR3P25106 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACKR3P25106 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACKR3P25106 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACKR3P25106 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ACKR3P25106 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACKR3P25106 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACKR3P25106 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACKR3P25106 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ACKR3P25106 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACKR3P25106 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ACKR3P25106 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACKR3P25106 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
ACKR3P25106 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.1■□□□□ 0.49
ACKR3P25106 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACKR3P25106 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ACKR3P25106 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACKR3P25106 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ACKR3P25106 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.1■□□□□ 0.49
ACKR3P25106 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.1■□□□□ 0.49
ACKR3P25106 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.1■□□□□ 0.49
ACKR3P25106 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ACKR3P25106 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.1■□□□□ 0.49
ACKR3P25106 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
ACKR3P25106 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACKR3P25106 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACKR3P25106 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.09■□□□□ 0.49
ACKR3P25106 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACKR3P25106 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACKR3P25106 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ACKR3P25106 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ACKR3P25106 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACKR3P25106 IRS3P-201ENST00000223076 1006 ntBASIC18.09■□□□□ 0.49
ACKR3P25106 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ACKR3P25106 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.09■□□□□ 0.49
ACKR3P25106 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.09■□□□□ 0.49
ACKR3P25106 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.09■□□□□ 0.49
ACKR3P25106 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.09■□□□□ 0.49
ACKR3P25106 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACKR3P25106 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ACKR3P25106 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ACKR3P25106 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.09■□□□□ 0.49
ACKR3P25106 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.09■□□□□ 0.49
ACKR3P25106 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACKR3P25106 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACKR3P25106 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACKR3P25106 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACKR3P25106 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ACKR3P25106 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ACKR3P25106 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ACKR3P25106 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ACKR3P25106 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ACKR3P25106 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ACKR3P25106 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ACKR3P25106 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
ACKR3P25106 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ACKR3P25106 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ACKR3P25106 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ACKR3P25106 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ACKR3P25106 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms