Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.93■□□□□ 0.62
CD53P19397 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CD53P19397 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CD53P19397 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD53P19397 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.93■□□□□ 0.62
CD53P19397 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.93■□□□□ 0.62
CD53P19397 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD53P19397 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD53P19397 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD53P19397 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD53P19397 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD53P19397 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CD53P19397 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.92■□□□□ 0.62
CD53P19397 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD53P19397 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.92■□□□□ 0.62
CD53P19397 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CD53P19397 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.92■□□□□ 0.62
CD53P19397 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CD53P19397 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CD53P19397 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CD53P19397 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.92■□□□□ 0.62
CD53P19397 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CD53P19397 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.92■□□□□ 0.62
CD53P19397 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.92■□□□□ 0.62
CD53P19397 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD53P19397 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CD53P19397 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD53P19397 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CD53P19397 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CD53P19397 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD53P19397 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CD53P19397 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD53P19397 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CD53P19397 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
CD53P19397 AL157384.1-201ENST00000445995 2473 ntBASIC18.92■□□□□ 0.62
CD53P19397 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD53P19397 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CD53P19397 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD53P19397 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CD53P19397 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CD53P19397 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD53P19397 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.91■□□□□ 0.62
CD53P19397 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CD53P19397 KRT18P61-201ENST00000585825 1298 ntBASIC18.91■□□□□ 0.62
CD53P19397 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.91■□□□□ 0.62
CD53P19397 RAP2CP1-201ENST00000605103 478 ntBASIC18.91■□□□□ 0.62
CD53P19397 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.91■□□□□ 0.62
CD53P19397 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD53P19397 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
CD53P19397 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.91■□□□□ 0.62
CD53P19397 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CD53P19397 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.9■□□□□ 0.62
CD53P19397 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD53P19397 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD53P19397 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD53P19397 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD53P19397 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CD53P19397 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD53P19397 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.9■□□□□ 0.62
CD53P19397 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CD53P19397 AC016769.1-201ENST00000409132 1010 ntBASIC18.9■□□□□ 0.62
CD53P19397 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.9■□□□□ 0.62
CD53P19397 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CD53P19397 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD53P19397 AC079089.2-201ENST00000531211 1277 ntBASIC18.9■□□□□ 0.62
CD53P19397 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CD53P19397 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD53P19397 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD53P19397 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD53P19397 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD53P19397 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CD53P19397 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CD53P19397 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CD53P19397 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CD53P19397 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD53P19397 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.89■□□□□ 0.61
CD53P19397 CDCA4P2-201ENST00000441182 718 ntBASIC18.89■□□□□ 0.61
CD53P19397 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.89■□□□□ 0.61
CD53P19397 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.89■□□□□ 0.61
CD53P19397 AC137761.2-201ENST00000561729 223 ntBASIC18.89■□□□□ 0.61
CD53P19397 AC145350.3-201ENST00000569033 163 ntBASIC18.89■□□□□ 0.61
CD53P19397 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.89■□□□□ 0.61
CD53P19397 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.89■□□□□ 0.61
CD53P19397 AC092667.1-201ENST00000434301 2586 ntBASIC18.89■□□□□ 0.61
CD53P19397 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD53P19397 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CD53P19397 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.89■□□□□ 0.61
CD53P19397 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD53P19397 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.89■□□□□ 0.61
CD53P19397 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD53P19397 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD53P19397 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD53P19397 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD53P19397 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD53P19397 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CD53P19397 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.88■□□□□ 0.61
CD53P19397 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.88■□□□□ 0.61
CD53P19397 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CD53P19397 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.88■□□□□ 0.61
CD53P19397 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms