Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
BEST1O76090 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
BEST1O76090 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
BEST1O76090 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
BEST1O76090 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
BEST1O76090 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
BEST1O76090 AC007322.1-201ENST00000426983 750 ntBASIC22.06■■□□□ 1.12
BEST1O76090 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.06■■□□□ 1.12
BEST1O76090 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.06■■□□□ 1.12
BEST1O76090 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.06■■□□□ 1.12
BEST1O76090 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.06■■□□□ 1.12
BEST1O76090 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.06■■□□□ 1.12
BEST1O76090 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.06■■□□□ 1.12
BEST1O76090 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.06■■□□□ 1.12
BEST1O76090 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.06■■□□□ 1.12
BEST1O76090 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.06■■□□□ 1.12
BEST1O76090 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.06■■□□□ 1.12
BEST1O76090 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
BEST1O76090 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
BEST1O76090 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
BEST1O76090 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.06■■□□□ 1.12
BEST1O76090 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
BEST1O76090 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.06■■□□□ 1.12
BEST1O76090 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
BEST1O76090 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
BEST1O76090 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
BEST1O76090 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
BEST1O76090 MIR663A-201ENST00000385250 93 ntBASIC22.05■■□□□ 1.12
BEST1O76090 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.05■■□□□ 1.12
BEST1O76090 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
BEST1O76090 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
BEST1O76090 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.05■■□□□ 1.12
BEST1O76090 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
BEST1O76090 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
BEST1O76090 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
BEST1O76090 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
BEST1O76090 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
BEST1O76090 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
BEST1O76090 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BEST1O76090 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BEST1O76090 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
BEST1O76090 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
BEST1O76090 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.04■■□□□ 1.12
BEST1O76090 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.04■■□□□ 1.12
BEST1O76090 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.04■■□□□ 1.12
BEST1O76090 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.04■■□□□ 1.12
BEST1O76090 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BEST1O76090 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.04■■□□□ 1.12
BEST1O76090 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
BEST1O76090 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.04■■□□□ 1.12
BEST1O76090 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.04■■□□□ 1.12
BEST1O76090 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.04■■□□□ 1.12
BEST1O76090 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.04■■□□□ 1.12
BEST1O76090 AC068338.2-201ENST00000563278 1430 ntBASIC22.04■■□□□ 1.12
BEST1O76090 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
BEST1O76090 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BEST1O76090 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
BEST1O76090 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
BEST1O76090 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BEST1O76090 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
BEST1O76090 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BEST1O76090 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.03■■□□□ 1.12
BEST1O76090 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.03■■□□□ 1.12
BEST1O76090 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.03■■□□□ 1.12
BEST1O76090 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.03■■□□□ 1.12
BEST1O76090 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.03■■□□□ 1.12
BEST1O76090 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.03■■□□□ 1.12
BEST1O76090 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BEST1O76090 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.03■■□□□ 1.12
BEST1O76090 AC013268.1-206ENST00000638368 961 ntBASIC22.03■■□□□ 1.12
BEST1O76090 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.03■■□□□ 1.12
BEST1O76090 AC112229.1-201ENST00000639295 961 ntBASIC22.03■■□□□ 1.12
BEST1O76090 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
BEST1O76090 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
BEST1O76090 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
BEST1O76090 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
BEST1O76090 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.02■■□□□ 1.12
BEST1O76090 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.02■■□□□ 1.12
BEST1O76090 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.02■■□□□ 1.12
BEST1O76090 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.02■■□□□ 1.12
BEST1O76090 AC005181.1-201ENST00000604782 1256 ntBASIC22.02■■□□□ 1.12
BEST1O76090 AC243732.1-201ENST00000612648 864 ntBASIC22.02■■□□□ 1.12
BEST1O76090 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.02■■□□□ 1.12
BEST1O76090 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.02■■□□□ 1.12
BEST1O76090 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
BEST1O76090 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
BEST1O76090 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
BEST1O76090 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
BEST1O76090 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BEST1O76090 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
BEST1O76090 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
BEST1O76090 AC006970.2-201ENST00000450065 779 ntBASIC22.01■■□□□ 1.11
BEST1O76090 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
BEST1O76090 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
BEST1O76090 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.01■■□□□ 1.11
BEST1O76090 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.01■■□□□ 1.11
BEST1O76090 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BEST1O76090 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22■■□□□ 1.11
BEST1O76090 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
BEST1O76090 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms