Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRANK1O15050 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
TRANK1O15050 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.27■■□□□ 1.15
TRANK1O15050 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
TRANK1O15050 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRANK1O15050 AL135905.2-201ENST00000584934 1404 ntBASIC22.26■■□□□ 1.15
TRANK1O15050 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.26■■□□□ 1.15
TRANK1O15050 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRANK1O15050 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRANK1O15050 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.26■■□□□ 1.15
TRANK1O15050 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.26■■□□□ 1.15
TRANK1O15050 AC087499.1-201ENST00000418141 1075 ntBASIC22.26■■□□□ 1.15
TRANK1O15050 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.26■■□□□ 1.15
TRANK1O15050 AL589743.5-201ENST00000616611 1050 ntBASIC22.26■■□□□ 1.15
TRANK1O15050 AC092865.7-201ENST00000641832 219 ntBASIC22.26■■□□□ 1.15
TRANK1O15050 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRANK1O15050 KRT17P2-201ENST00000300992 1314 ntBASIC22.26■■□□□ 1.15
TRANK1O15050 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRANK1O15050 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRANK1O15050 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRANK1O15050 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRANK1O15050 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRANK1O15050 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
TRANK1O15050 WDR88-203ENST00000592765 651 ntTSL 5 BASIC22.25■■□□□ 1.15
TRANK1O15050 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRANK1O15050 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRANK1O15050 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.25■■□□□ 1.15
TRANK1O15050 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRANK1O15050 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.25■■□□□ 1.15
TRANK1O15050 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.25■■□□□ 1.15
TRANK1O15050 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
TRANK1O15050 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRANK1O15050 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRANK1O15050 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRANK1O15050 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRANK1O15050 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
TRANK1O15050 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.24■■□□□ 1.15
TRANK1O15050 AC124016.1-201ENST00000609552 612 ntBASIC22.24■■□□□ 1.15
TRANK1O15050 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.24■■□□□ 1.15
TRANK1O15050 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRANK1O15050 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.24■■□□□ 1.15
TRANK1O15050 KRT18P35-201ENST00000510488 1269 ntBASIC22.24■■□□□ 1.15
TRANK1O15050 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRANK1O15050 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRANK1O15050 CD177P1-201ENST00000606252 935 ntBASIC22.24■■□□□ 1.15
TRANK1O15050 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRANK1O15050 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
TRANK1O15050 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRANK1O15050 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.24■■□□□ 1.15
TRANK1O15050 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
TRANK1O15050 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
TRANK1O15050 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRANK1O15050 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRANK1O15050 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRANK1O15050 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRANK1O15050 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
TRANK1O15050 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.23■■□□□ 1.15
TRANK1O15050 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.23■■□□□ 1.15
TRANK1O15050 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
TRANK1O15050 MIR4785-201ENST00000585005 73 ntBASIC22.23■■□□□ 1.15
TRANK1O15050 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.23■■□□□ 1.15
TRANK1O15050 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.23■■□□□ 1.15
TRANK1O15050 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.23■■□□□ 1.15
TRANK1O15050 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRANK1O15050 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRANK1O15050 AC133681.1-201ENST00000465482 601 ntBASIC22.23■■□□□ 1.15
TRANK1O15050 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRANK1O15050 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.22■■□□□ 1.15
TRANK1O15050 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.22■■□□□ 1.15
TRANK1O15050 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
TRANK1O15050 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.22■■□□□ 1.15
TRANK1O15050 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TRANK1O15050 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRANK1O15050 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
TRANK1O15050 AC087742.1-201ENST00000575880 1738 ntBASIC22.22■■□□□ 1.15
TRANK1O15050 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRANK1O15050 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.22■■□□□ 1.15
TRANK1O15050 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.22■■□□□ 1.15
TRANK1O15050 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
TRANK1O15050 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRANK1O15050 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRANK1O15050 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRANK1O15050 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
TRANK1O15050 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.21■■□□□ 1.15
TRANK1O15050 AC133561.5-201ENST00000635547 218 ntBASIC22.21■■□□□ 1.15
TRANK1O15050 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.21■■□□□ 1.15
TRANK1O15050 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRANK1O15050 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRANK1O15050 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRANK1O15050 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRANK1O15050 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.21■■□□□ 1.15
TRANK1O15050 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRANK1O15050 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRANK1O15050 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.21■■□□□ 1.15
TRANK1O15050 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRANK1O15050 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
TRANK1O15050 AP001412.1-201ENST00000608405 714 ntBASIC22.2■■□□□ 1.15
TRANK1O15050 AL353708.3-201ENST00000610272 989 ntBASIC22.2■■□□□ 1.15
TRANK1O15050 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.2■■□□□ 1.15
TRANK1O15050 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.2■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms