Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC1O00299 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC1O00299 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.7■□□□□ 0.74
CLIC1O00299 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.7■□□□□ 0.74
CLIC1O00299 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC1O00299 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CLIC1O00299 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC1O00299 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC1O00299 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLIC1O00299 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC1O00299 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLIC1O00299 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CLIC1O00299 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC1O00299 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC1O00299 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CLIC1O00299 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC1O00299 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC1O00299 AC121338.2-201ENST00000622535 1744 ntBASIC19.69■□□□□ 0.74
CLIC1O00299 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.69■□□□□ 0.74
CLIC1O00299 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.69■□□□□ 0.74
CLIC1O00299 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC1O00299 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC1O00299 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC1O00299 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLIC1O00299 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC1O00299 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.69■□□□□ 0.74
CLIC1O00299 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CLIC1O00299 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.69■□□□□ 0.74
CLIC1O00299 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC1O00299 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC1O00299 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC1O00299 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.68■□□□□ 0.74
CLIC1O00299 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.68■□□□□ 0.74
CLIC1O00299 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CLIC1O00299 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC1O00299 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC1O00299 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC1O00299 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC1O00299 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CLIC1O00299 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.68■□□□□ 0.74
CLIC1O00299 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.68■□□□□ 0.74
CLIC1O00299 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLIC1O00299 AC008764.7-201ENST00000593779 1081 ntBASIC19.68■□□□□ 0.74
CLIC1O00299 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CLIC1O00299 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.68■□□□□ 0.74
CLIC1O00299 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC1O00299 GABARAPL3-202ENST00000624044 1851 ntBASIC19.68■□□□□ 0.74
CLIC1O00299 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC1O00299 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CLIC1O00299 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CLIC1O00299 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CLIC1O00299 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC1O00299 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC1O00299 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.68■□□□□ 0.74
CLIC1O00299 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC1O00299 AC005224.4-201ENST00000583262 1652 ntBASIC19.68■□□□□ 0.74
CLIC1O00299 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CLIC1O00299 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC1O00299 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC1O00299 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC1O00299 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CLIC1O00299 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CLIC1O00299 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC1O00299 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC1O00299 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC1O00299 AP005212.1-201ENST00000581547 1997 ntBASIC19.67■□□□□ 0.74
CLIC1O00299 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.67■□□□□ 0.74
CLIC1O00299 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC1O00299 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CLIC1O00299 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.67■□□□□ 0.74
CLIC1O00299 AC105233.4-201ENST00000642045 216 ntBASIC19.67■□□□□ 0.74
CLIC1O00299 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC1O00299 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC1O00299 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.67■□□□□ 0.74
CLIC1O00299 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLIC1O00299 AC073314.1-201ENST00000568729 2216 ntBASIC19.67■□□□□ 0.74
CLIC1O00299 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC1O00299 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC1O00299 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.66■□□□□ 0.74
CLIC1O00299 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
CLIC1O00299 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CLIC1O00299 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIC1O00299 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CLIC1O00299 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.65■□□□□ 0.74
CLIC1O00299 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC1O00299 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIC1O00299 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms